DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70Cb and SSA2

DIOPT Version :9

Sequence 1:NP_001189103.1 Gene:Hsc70Cb / 39557 FlyBaseID:FBgn0026418 Length:836 Species:Drosophila melanogaster
Sequence 2:NP_013076.1 Gene:SSA2 / 850636 SGDID:S000003947 Length:639 Species:Saccharomyces cerevisiae


Alignment Length:707 Identity:198/707 - (28%)
Similarity:342/707 - (48%) Gaps:116/707 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IGIDFGNESCYVAAARSGGIETLANDYSLRATPSFVAFDGKKRIIGVAAKNQQVTNMKNTVGGFK 68
            :|||.|.....||...:..::.:|||...|.|||||.|...:|:||.|||||...|..|||...|
Yeast     5 VGIDLGTTYSCVAHFSNDRVDIIANDQGNRTTPSFVGFTDTERLIGDAAKNQAAMNPANTVFDAK 69

  Fly    69 RLLGRKFNDPHVQHELTSIPARVEARGDGSIGIKVNYLGEDQHFGPEQLTAMLFTKLKETSAAAM 133
            ||:||.||||.||.::...|.:: ...||...|:|.:.||.::|.|||:::|:..|:|||:.:.:
Yeast    70 RLIGRNFNDPEVQGDMKHFPFKL-IDVDGKPQIQVEFKGETKNFTPEQISSMVLGKMKETAESYL 133

  Fly   134 QTQVNDCVIACPVFFTNAERKALLDAAQIAGLNVLRLMNETTATALAYGFYKNDLFEDKPRNVIF 198
            ..:|||.|:..|.:|.:::|:|..||..||||||||::||.||.|:|||..|    :.|..:|:.
Yeast   134 GAKVNDAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDK----KGKEEHVLI 194

  Fly   199 VDFGHSSLQASACAFTKGKLKMLASTWD-QIGGRDIDLALGDYFAKEFQERYKINAKTNARANLR 262
            .|.|..:...|..:...|..::.|:..| .:||.|.|..|.::|.:||:.:.|.:..||.||..|
Yeast   195 FDLGGGTFDVSLLSIEDGIFEVKATAGDTHLGGEDFDNRLVNHFIQEFKRKNKKDLSTNQRALRR 259

  Fly   263 LLTEIEKLKKQMSANSTKLPLNIECFLDDIDVSSSMQRSQMEELCAPVLQRVEQTFKRLLAESKL 327
            |.|..|:.|:.:| :|.:..:.|:...:.||..:|:.|::.|||||.:.:......:::|.::||
Yeast   260 LRTACERAKRTLS-SSAQTSVEIDSLFEGIDFYTSITRARFEELCADLFRSTLDPVEKVLRDAKL 323

  Fly   328 QLDDIHSVEIVGGSSRIPSVKQLIEQVFN-KPASTTLNQDEAVSRGAALQCAIMS--PAVRVREF 389
            ....:..:.:||||:|||.|::|:...|| |..:.::|.||||:.|||:|.||::  .:.:.::.
Yeast   324 DKSQVDEIVLVGGSTRIPKVQKLVTDYFNGKEPNRSINPDEAVAYGAAVQAAILTGDESSKTQDL 388

  Fly   390 GVTDIQNYAVKV---------LWDSEGSAAPGEIEIFPQYHASPFSRLLTINRKGPFNVSIVYGQ 445
            .:.|:...::.:         |.....:....:.|:|..|         ..|:.|.. :.:..|:
Yeast   389 LLLDVAPLSLGIETAGGVMTKLIPRNSTIPTKKSEVFSTY---------ADNQPGVL-IQVFEGE 443

  Fly   446 QVPYPDQT-IGVWKVKDVKPTERGEGQDVKLKVRINNNGIVLISSATLVEKKEAEEAAAAAEQAA 509
            :....|.. :|.:::..:.|..||..| :::...:::|||:.:|:   |||              
Yeast   444 RAKTKDNNLLGKFELSGIPPAPRGVPQ-IEVTFDVDSNGILNVSA---VEK-------------- 490

  Fly   510 SEEKPGDQTNNTGEPADGQQEAYCENEDDNNTSTASSPGGQGWAQRVKGWFGSGADKKKKASKAT 574
                      .||:               :|..|.::..|:                        
Yeast   491 ----------GTGK---------------SNKITITNDKGR------------------------ 506

  Fly   575 ELPLECTTHGFSPVDLSNYTQQESKMIGNDQKETERIDAKNALEEFVYDMRNKLQ--GGPFERYV 637
                      .|..|:.....:..|....|:||::||.:||.||...|.::|.:.  |...|   
Yeast   507 ----------LSKEDIEKMVAEAEKFKEEDEKESQRIASKNQLESIAYSLKNTISEAGDKLE--- 558

  Fly   638 VEAEREKIVSQLNDLENWLYEDGEDCERDIYTSRLQALHQKTDPIKLRASDYEQGPA 694
             :|:::.:..:..:...|| :......::.:..:|:.|.:..:||..:.  |:.|.|
Yeast   559 -QADKDAVTKKAEETIAWL-DSNTTATKEEFDDQLKELQEVANPIMSKL--YQAGGA 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70CbNP_001189103.1 HSPA4_like_NDB 2..381 CDD:212670 146/378 (39%)
HSP70 3..682 CDD:278441 193/693 (28%)
SSA2NP_013076.1 PTZ00009 4..639 CDD:240227 198/707 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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