DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70Cb and hspa1l

DIOPT Version :9

Sequence 1:NP_001189103.1 Gene:Hsc70Cb / 39557 FlyBaseID:FBgn0026418 Length:836 Species:Drosophila melanogaster
Sequence 2:NP_001072429.1 Gene:hspa1l / 779883 XenbaseID:XB-GENE-6045069 Length:639 Species:Xenopus tropicalis


Alignment Length:690 Identity:194/690 - (28%)
Similarity:348/690 - (50%) Gaps:101/690 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IGIDFGNESCYVAAARSGGIETLANDYSLRATPSFVAFDGKKRIIGVAAKNQQVTNMKNTVGGFK 68
            ||||.|.....|...:.|.:|.:|||...|.|||:|||...:|:||.|||||...|..|||...|
 Frog     8 IGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPHNTVFDAK 72

  Fly    69 RLLGRKFNDPHVQHELTSIPARVEARGDGSIGIKVNYLGEDQHFGPEQLTAMLFTKLKETSAAAM 133
            ||:|||:::|.||.::...|.:|.:.| |...:.|.|.||.:.|.||::::|:.||:|||:.|.:
 Frog    73 RLIGRKYDEPVVQSDMKHWPFKVISDG-GKPKVTVEYKGEGKSFSPEEISSMVLTKMKETAEAYL 136

  Fly   134 QTQVNDCVIACPVFFTNAERKALLDAAQIAGLNVLRLMNETTATALAYGFYKNDLFEDKPRNVIF 198
            ..:|.:.||..|.:|.:::|:|..||..||||||||::||.||.|:|||..|:...|   ||::.
 Frog   137 GYKVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDKSGRGE---RNILI 198

  Fly   199 VDFGHSSLQASACAFTKGKLKMLASTWD-QIGGRDIDLALGDYFAKEFQERYKINAKTNARANLR 262
            .|.|..:...|......|..::.|:..| .:||.|.|..:.::|.:||:.::|.:...|.||..|
 Frog   199 FDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNCMVNHFVEEFKRKHKKDISPNKRALRR 263

  Fly   263 LLTEIEKLKKQMSANSTKLPLNIECFLDDIDVSSSMQRSQMEELCAPVLQRVEQTFKRLLAESKL 327
            |.|..|:.|:.:| :||:..:.|:...:.||..:|:.|::.|||||.:.:...:..::.:.::||
 Frog   264 LRTACERAKRTLS-SSTQASIEIDSLFEGIDFYTSITRARFEELCADLFRGTLEPVEKAMRDAKL 327

  Fly   328 QLDDIHSVEIVGGSSRIPSVKQLIEQVFN-KPASTTLNQDEAVSRGAALQCAIM--SPAVRVREF 389
            ....||.:.:||||:|||.|::|::..|| |..:.::|.||||:.|||:|.||:  ..:..|::.
 Frog   328 DKSQIHEIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILMGDKSENVQDL 392

  Fly   390 GVTDIQNYAVKVLWDSEGSAAPGEIEIFPQYHAS-PFSRLLTI-----NRKGPFNVSIVYGQQVP 448
            .:.|:...::.:      ..|.|.:.:..:.:.: |..:..|.     |:.|.. :.:..|::..
 Frog   393 LLLDVAPLSLGL------ETAGGVMTVLIKRNTTIPIKQTQTFTTYSDNQPGVL-IQVYEGERAM 450

  Fly   449 YPDQT-IGVWKVKDVKPTERGEGQDVKLKVRINNNGIVLISSATLVEKKEAEEAAAAAEQAASEE 512
            ..|.. :|.:.:..:.|..||..| :::...|:.|||:.:|               |.::::.::
 Frog   451 TKDNNLLGKFDLTGIPPAPRGVPQ-IEVTFDIDANGILNVS---------------AVDKSSGKK 499

  Fly   513 KPGDQTNNTGEPADGQQEAYCENEDDNNTSTASSPGGQGWAQRVKGWFGSGADKKKKASKATELP 577
            .....||:.|.                                                      
 Frog   500 NKITITNDKGR------------------------------------------------------ 510

  Fly   578 LECTTHGFSPVDLSNYTQQESKMIGNDQKETERIDAKNALEEFVYDMRNKLQGGPFERYVVEAER 642
                   .|..::....|:..|...:|:::.|:|.|||:||.:.::|::.::....:..:.::::
 Frog   511 -------LSKEEIERMLQEADKYKADDEQQREKIAAKNSLESYAFNMKSTVEDNNIKDKISDSDK 568

  Fly   643 EKIVSQLNDLENWLYEDGEDCERDIYTSRLQALHQKTDPI 682
            :.|:.:..::.:|| |..:..|::.||.:.:.|.:..:||
 Frog   569 KSILDKCQEVISWL-EQNQLAEKEEYTHKQKELEKLCNPI 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70CbNP_001189103.1 HSPA4_like_NDB 2..381 CDD:212670 148/380 (39%)
HSP70 3..682 CDD:278441 192/688 (28%)
hspa1lNP_001072429.1 HSP70 2..639 CDD:331774 194/690 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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