DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70Cb and hspa14

DIOPT Version :9

Sequence 1:NP_001189103.1 Gene:Hsc70Cb / 39557 FlyBaseID:FBgn0026418 Length:836 Species:Drosophila melanogaster
Sequence 2:NP_001015780.1 Gene:hspa14 / 548497 XenbaseID:XB-GENE-5932856 Length:508 Species:Xenopus tropicalis


Alignment Length:393 Identity:130/393 - (33%)
Similarity:213/393 - (54%) Gaps:28/393 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSVIGIDFGNESCYVAAARSGGIETLANDYSLRATPSFVAFDGKKRIIGVAAKNQQVTNMKNTVG 65
            |:.||:..|.....||..:.|..:.:|||...|.||:.|.|..|:.|:|:|||..:|.|..||:.
 Frog     1 MAAIGVHLGCTCACVAVYKDGRADVVANDAGDRVTPAVVGFLEKETIVGLAAKQSRVRNATNTIV 65

  Fly    66 GFKRLLGRKFNDPHVQHELTSIPARVEARGDGSIGIKVNY---LGEDQHF-GPEQLTAMLFTKLK 126
            ..|::|||.:.|||.|..::.....|..:    :| |..|   .||.|.| ..|.:..::|:|:|
 Frog    66 KVKQILGRSYGDPHTQKHISESKCIVVEK----VG-KPKYEIDTGETQKFVSSEDVAKLIFSKMK 125

  Fly   127 ETSAAAMQTQVNDCVIACPVFFTNAERKALLDAAQIAGLNVLRLMNETTATALAYGFYKNDLFED 191
            ||:.:|:.:.|||.||..|..|..:::|||.:||..||.::||:::|.:|..||||     :.::
 Frog   126 ETAQSALGSDVNDVVITVPFDFGESQKKALGEAATAAGFSILRMIHEPSAALLAYG-----IGQE 185

  Fly   192 KP---RNVIFVDFGHSSLQASACAFTKGKLKMLA-STWDQIGGRDIDLALGDYFAKEFQERYKIN 252
            .|   .||:....|.:||..:......|..::|| ||:|.|||.....||..:.|.|||..||.:
 Frog   186 SPTGKSNVLVYKLGGTSLSVTVIEVNSGIYRVLATSTYDDIGGICFTEALAQHLASEFQRTYKQD 250

  Fly   253 AKTNARANLRLLTEIEKLKKQMSANSTKLPLNIECFLDD----IDVSSSMQRSQMEELCAPVLQR 313
            .:.||||.::|:...:..|..:|...:.     .||:|.    ||...::.|::.|.:|:.:..:
 Frog   251 IRGNARAMMKLMNSADVAKHALSTLGSS-----NCFVDSLYDGIDFDCNVSRARFELICSSLFNQ 310

  Fly   314 VEQTFKRLLAESKLQLDDIHSVEIVGGSSRIPSVKQLIEQVFNK-PASTTLNQDEAVSRGAALQC 377
            .....|:||.:...:.:|::.|.:.|||:|||.::|||:.:|.: ...:::..||.:..|||:|.
 Frog   311 CIDPIKKLLEQIGFKANDVNQVVLCGGSARIPKLQQLIKDLFPEVEMLSSIPPDEVIPVGAAIQA 375

  Fly   378 AIM 380
            .|:
 Frog   376 GIL 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70CbNP_001189103.1 HSPA4_like_NDB 2..381 CDD:212670 129/392 (33%)
HSP70 3..682 CDD:278441 129/391 (33%)
hspa14NP_001015780.1 HSPA14-like_NBD 2..376 CDD:212680 128/388 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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