DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70Cb and Hsp70Ab

DIOPT Version :9

Sequence 1:NP_001189103.1 Gene:Hsc70Cb / 39557 FlyBaseID:FBgn0026418 Length:836 Species:Drosophila melanogaster
Sequence 2:NP_524798.2 Gene:Hsp70Ab / 44920 FlyBaseID:FBgn0013276 Length:642 Species:Drosophila melanogaster


Alignment Length:704 Identity:202/704 - (28%)
Similarity:342/704 - (48%) Gaps:99/704 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSVIGIDFGNESCYVAAARSGGIETLANDYSLRATPSFVAFDGKKRIIGVAAKNQQVTNMKNTVG 65
            |..||||.|.....|...:.|.:|.:|||...|.|||:|||...:|:||..||||...|.:|||.
  Fly     1 MPAIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVF 65

  Fly    66 GFKRLLGRKFNDPHVQHELTSIPARVEARGDGSIGIKVNYLGEDQHFGPEQLTAMLFTKLKETSA 130
            ..|||:|||::||.:..::...|.:|.:.| |...|.|.|.||.:.|.||::::|:.||:|||:.
  Fly    66 DAKRLIGRKYDDPKIAEDMKHWPFKVVSDG-GKPKIGVEYKGESKRFAPEEISSMVLTKMKETAE 129

  Fly   131 AAMQTQVNDCVIACPVFFTNAERKALLDAAQIAGLNVLRLMNETTATALAYGFYKNDLFEDKPRN 195
            |.:...:.|.||..|.:|.:::|:|..||..||||||||::||.||.|||||..||...|   ||
  Fly   130 AYLGESITDAVITVPAYFNDSQRQATKDAGHIAGLNVLRIINEPTAAALAYGLDKNLKGE---RN 191

  Fly   196 VIFVDFGHSSLQASACAFTKGKLKMLASTW--DQIGGRDIDLALGDYFAKEFQERYKINAKTNAR 258
            |:..|.|..:...|.....:|.|..:.||.  ..:||.|.|..|..:.|.||:.:||.:.::|.|
  Fly   192 VLIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVTHLADEFKRKYKKDLRSNPR 256

  Fly   259 ANLRLLTEIEKLKKQMSANSTKLPLNIECFLDDIDVSSSMQRSQMEELCAPVLQRVEQTFKRLLA 323
            |..||.|..|:.|:.:| :||:..:.|:...:..|..:.:.|::.|||||.:.:...|..::.|.
  Fly   257 ALRRLRTAAERAKRTLS-SSTEATIEIDALFEGQDFYTKVSRARFEELCADLFRNTLQPVEKALN 320

  Fly   324 ESKLQLDDIHSVEIVGGSSRIPSVKQLIEQVFN-KPASTTLNQDEAVSRGAALQCAIMS--PAVR 385
            ::|:....||.:.:||||:|||.|:.|::..|: |..:.::|.||||:.|||:|.||:|  .:.:
  Fly   321 DAKMDKGQIHDIVLVGGSTRIPKVQSLLQDFFHGKNLNLSINPDEAVAYGAAVQAAILSGDQSGK 385

  Fly   386 VREFGVTDIQNYAVKVLWDSEGSAAPGEIE---IFPQYHASPFSRLLTINRKGPFNVSIVYGQQV 447
            :::..:.|:...::.:  ::.|......||   ..|......||.... |:.| .::.:..|::.
  Fly   386 IQDVLLVDVAPLSLGI--ETAGGVMTKLIERNCRIPCKQTKTFSTYAD-NQPG-VSIQVYEGERA 446

  Fly   448 PYPD-QTIGVWKVKDVKPTERGEGQDVKLKVRINNNGIVLISSATLVEKKEAEEAAAAAEQAASE 511
            ...| ..:|.:.:..:.|..||..| :::...::.|||:.:|:                      
  Fly   447 MTKDNNALGTFDLSGIPPAPRGVPQ-IEVTFDLDANGILNVSA---------------------- 488

  Fly   512 EKPGDQTNNTGEPADGQQEAYCENEDDNNTSTASSPGGQGWAQRVKGWFGSGADKKKKASKATEL 576
                                                                  |:....||..:
  Fly   489 ------------------------------------------------------KEMSTGKAKNI 499

  Fly   577 PLECTTHGFSPVDLSNYTQQESKMIGNDQKETERIDAKNALEEFVYDMRNKLQGGPFERYVVEAE 641
            .::......|..::.....:..|....|:|..:||.::||||.:|::::..::..|..: :.||:
  Fly   500 TIKNDKGRLSQAEIDRMVNEAEKYADEDEKHRQRITSRNALESYVFNVKQAVEQAPAGK-LDEAD 563

  Fly   642 REKIVSQLNDLENWLYEDGEDCERDIYTSRLQALHQKTDPIKLRASDYEQGPAA 695
            :..::.:.||...|| :.....|::.:..:|:.|.:...||..:.  ::||..|
  Fly   564 KNSVLDKCNDTIRWL-DSNTTAEKEEFDHKLEELTRHCSPIMTKM--HQQGAGA 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70CbNP_001189103.1 HSPA4_like_NDB 2..381 CDD:212670 151/381 (40%)
HSP70 3..682 CDD:278441 196/687 (29%)
Hsp70AbNP_524798.2 PTZ00009 2..642 CDD:240227 201/703 (29%)
HSPA1-2_6-8-like_NBD 3..379 CDD:212675 151/380 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464200
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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