DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70Cb and Hsp68

DIOPT Version :9

Sequence 1:NP_001189103.1 Gene:Hsc70Cb / 39557 FlyBaseID:FBgn0026418 Length:836 Species:Drosophila melanogaster
Sequence 2:NP_524474.1 Gene:Hsp68 / 42852 FlyBaseID:FBgn0001230 Length:635 Species:Drosophila melanogaster


Alignment Length:704 Identity:204/704 - (28%)
Similarity:338/704 - (48%) Gaps:98/704 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSVIGIDFGNESCYVAAARSGGIETLANDYSLRATPSFVAFDGKKRIIGVAAKNQQVTNMKNTVG 65
            |..||||.|.....|...:.|.:|.:|||...|.|||:|||...:|:||.|||||...|.||:|.
  Fly     1 MPAIGIDLGTTYSCVGVFQYGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPKNSVF 65

  Fly    66 GFKRLLGRKFNDPHVQHELTSIPARVEARGDGSIGIKVNYLGEDQHFGPEQLTAMLFTKLKETSA 130
            ..|||:||:|:|..:|.::...|.:| ...:|...|.|.:.|.::.|.||::::|:.||:|||:.
  Fly    66 DAKRLIGRRFDDSKIQEDIKHWPFKV-INDNGKPKISVEFKGANKCFSPEEISSMVLTKMKETAE 129

  Fly   131 AAMQTQVNDCVIACPVFFTNAERKALLDAAQIAGLNVLRLMNETTATALAYGFYKNDLFEDKPRN 195
            |.:.|.|.|.||..|.:|.:::|:|..||..|||:||||::||.||.|||||..||...|   ||
  Fly   130 AYLGTTVKDAVITVPAYFNDSQRQATKDAGAIAGINVLRIINEPTAAALAYGLDKNLKGE---RN 191

  Fly   196 VIFVDFGHSSLQASACAFTKGKLKMLASTW--DQIGGRDIDLALGDYFAKEFQERYKINAKTNAR 258
            |:..|.|..:...|.....:|.|..:.||.  ..:||.|.|..|.::||:||:.:||.:.::|.|
  Fly   192 VLIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVNHFAEEFKRKYKKDLRSNPR 256

  Fly   259 ANLRLLTEIEKLKKQMSANSTKLPLNIECFLDDIDVSSSMQRSQMEELCAPVLQRVEQTFKRLLA 323
            |..||.|..|:.|:.:| :||:..|.|:...:..|..|.:.|::.||||..:.:...:..::.|.
  Fly   257 ALRRLRTAAERAKRTLS-SSTEASLEIDALYEGHDFYSKVSRARFEELCGDLFRNTLEPVEKALK 320

  Fly   324 ESKLQLDDIHSVEIVGGSSRIPSVKQLIEQVF-NKPASTTLNQDEAVSRGAALQCAIMS--PAVR 385
            ::|:....||.:.:||||:|||.|:.|::..| .|..:.::|.||||:.|||:|.||:|  .:..
  Fly   321 DAKMDKSQIHDIVLVGGSTRIPKVQNLLQNFFGGKTLNLSINPDEAVAYGAAIQAAILSGDKSSE 385

  Fly   386 VREFGVTDIQNYAVKVLWDSEGSAAPGEIEIFPQYHASPFSRLLTINRKGP-FNVSIVYGQQVPY 449
            :::..:.|:...::.:  ::.|......||...:..........|.....| ..:.:..|::...
  Fly   386 IKDVLLVDVAPLSLGI--ETAGGVMTKLIERNSRIPCKQSKTFTTYADNQPAVTIQVFEGERALT 448

  Fly   450 PDQTI-GVWKVKDVKPTERGEGQDVKLKVRINNNGIVLISSATLVEKKEAEEAAAAAEQAASEEK 513
            .|..: |.:.:..|.|..||..: :.:...::.|||:.::                    |.|:.
  Fly   449 KDNNVLGTFDLTGVPPAPRGVPK-IDVTFDLDANGILNVT--------------------AKEQG 492

  Fly   514 PGDQTNNTGEPADGQQEAYCENEDDNNTSTASSPGGQGWAQRVKGWFGSGADKKKKASKATELPL 578
            .|:..|.|                                  :|.      ||.:          
  Fly   493 TGNAKNIT----------------------------------IKN------DKGR---------- 507

  Fly   579 ECTTHGFSPVDLSNYTQQESKMIGNDQKETERIDAKNALEEFVYDMRNKLQGGPFERYVVEAERE 643
                  .|..|:.....:..|....|::..:||.|:|.||.:::.::...:.|. :| :..|::.
  Fly   508 ------LSQADIDRMLSEAEKYAEEDERHRQRIAARNQLETYLFGVKEAAENGG-DR-ISAADKS 564

  Fly   644 KIVSQLNDLENWLYEDGEDCERDIYTSRLQALHQKTDPIKLR----ASDYEQGP 693
            .||.:.::...|| :.....|::.|..:|:.|.|...||..:    ..|.:|.|
  Fly   565 SIVERCSEAMKWL-DSNTTAEKEEYEYKLKELEQFCSPIMTKMHKGGGDGQQAP 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70CbNP_001189103.1 HSPA4_like_NDB 2..381 CDD:212670 151/381 (40%)
HSP70 3..682 CDD:278441 198/685 (29%)
Hsp68NP_524474.1 PTZ00009 2..635 CDD:240227 203/703 (29%)
HSPA1-2_6-8-like_NBD 3..379 CDD:212675 151/380 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464199
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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