DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70Cb and Hsc70-1

DIOPT Version :9

Sequence 1:NP_001189103.1 Gene:Hsc70Cb / 39557 FlyBaseID:FBgn0026418 Length:836 Species:Drosophila melanogaster
Sequence 2:NP_524063.1 Gene:Hsc70-1 / 39542 FlyBaseID:FBgn0001216 Length:641 Species:Drosophila melanogaster


Alignment Length:699 Identity:201/699 - (28%)
Similarity:334/699 - (47%) Gaps:107/699 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSVIGIDFGNESCYVAAARSGGIETLANDYSLRATPSFVAFDGKKRIIGVAAKNQQVTNMKNTVG 65
            :..:|||.|.....|...:.|.:|.:|||...|.|||:|||...:|:||.|||||...|..||:.
  Fly     4 LPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTESERLIGDAAKNQVAMNPNNTIF 68

  Fly    66 GFKRLLGRKFNDPHVQHELTSIPARVEARGDGSIGIKVNYLGEDQHFGPEQLTAMLFTKLKETSA 130
            ..|||:||:|:|..||.::...|..|.|. :|...|:|.|.||.:.|.||::::|:.||::||:.
  Fly    69 DAKRLIGRRFDDATVQSDMKHWPFEVFAE-NGKPRIRVEYKGERKSFYPEEVSSMVLTKMRETAE 132

  Fly   131 AAMQTQVNDCVIACPVFFTNAERKALLDAAQIAGLNVLRLMNETTATALAYGFYKNDLFEDKPRN 195
            |.:...|.|.|:..|.:|.:::|:|..||..||||||||::||.||.|:|||..|....|   ||
  Fly   133 AYLGGTVTDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKQGTSE---RN 194

  Fly   196 VIFVDFGHSSLQASACAFTKGKLKMLASTWD-QIGGRDIDLALGDYFAKEFQERYKINAKTNARA 259
            |:..|.|..:...|......|..::.|:..| .:||.|.|..|.::|.:|||.::|.:...|.||
  Fly   195 VLIFDLGGGTFDVSVLTIEDGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFQRKHKKDLGQNKRA 259

  Fly   260 NLRLLTEIEKLKKQMSANSTKLPLNIECFLDDIDVSSSMQRSQMEELCAPVLQRVEQTFKRLLAE 324
            ..||.|..|:.|:.:| :||:..:.|:...:.:|..:|:.|::.|||...:.:...:...:.|.:
  Fly   260 LRRLRTACERAKRTLS-SSTQASIEIDSLFEGVDFYTSVTRARFEELNGDLFRGTMEPVAKALRD 323

  Fly   325 SKLQLDDIHSVEIVGGSSRIPSVKQLIEQVFN-KPASTTLNQDEAVSRGAALQCAIM--SPAVRV 386
            :|:....||.:.:||||:|||.|::|::..|| |..:.::|.||||:.|||:|.||:  ..:..|
  Fly   324 AKMDKGQIHDIVLVGGSTRIPKVQRLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEAV 388

  Fly   387 REFGVTDIQNYAVKV---------LWDSEGSAAPGEIEIFPQYHASPFSRLLTINRKGPFNVSIV 442
            ::..:.|:...::.:         |.....:....:.:||..|         ..|:.|.. :.:.
  Fly   389 QDLLLLDVTPLSLGIETAGGVMTTLIKRNTTIPTKQTQIFTTY---------ADNQPGVL-IQVF 443

  Fly   443 YGQQVPYPD-QTIGVWKVKDVKPTERGEGQDVKLKVRINNNGIVLISSATLVEKKEAEEAAAAAE 506
            .|::....| .::|.:::..:.|..||..| |::...|:.|||:   :.|.:||...:|      
  Fly   444 EGERAMTRDNNSLGKFELSAIPPAPRGVPQ-VEVTFDIDANGIL---NVTALEKSTGKE------ 498

  Fly   507 QAASEEKPGDQTNNTGEPADGQQEAYCENEDDNNTSTASSPGGQGWAQRVKGWFGSGADKKKKAS 571
                                             |..|.::                  ||.:.:.
  Fly   499 ---------------------------------NRITITN------------------DKGRLSK 512

  Fly   572 KATELPLECTTHGFSPVDLSNYTQQESKMIGNDQKETERIDAKNALEEFVYDMRNKLQGGPFERY 636
            :..|..:.         |...|.|.       |:::.:||:|||.||.:.:.:|:.|........
  Fly   513 EDIERMVN---------DAEAYRQA-------DEQQRDRINAKNQLESYCFQLRSTLDDEHLSSR 561

  Fly   637 VVEAEREKIVSQLNDLENWLYEDGEDCERDIYTSRLQALHQKTDPIKLR 685
            ...|:||.|..:.::...|| :..:..||..:..:.|.|.:...||..|
  Fly   562 FSPADRETIQQRSSETIAWL-DANQLAERQEFEHKQQELERICSPIITR 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70CbNP_001189103.1 HSPA4_like_NDB 2..381 CDD:212670 146/382 (38%)
HSP70 3..682 CDD:278441 198/692 (29%)
Hsc70-1NP_524063.1 PTZ00009 1..641 CDD:240227 201/699 (29%)
HSPA1-2_6-8-like_NBD 6..381 CDD:212675 146/379 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464204
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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