DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70Cb and hsc70

DIOPT Version :9

Sequence 1:NP_001189103.1 Gene:Hsc70Cb / 39557 FlyBaseID:FBgn0026418 Length:836 Species:Drosophila melanogaster
Sequence 2:NP_956908.1 Gene:hsc70 / 393586 ZFINID:ZDB-GENE-040426-1221 Length:647 Species:Danio rerio


Alignment Length:691 Identity:192/691 - (27%)
Similarity:339/691 - (49%) Gaps:103/691 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IGIDFGNESCYVAAARSGGIETLANDYSLRATPSFVAFDGKKRIIGVAAKNQQVTNMKNTVGGFK 68
            :|||.|.....|...:.|.:|.:|||...|.|||:|||...:|:||.|||||...|..|||...|
Zfish     7 VGIDLGTTYSCVGIFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPSNTVFDAK 71

  Fly    69 RLLGRKFNDPHVQHELTSIPARVEARGDGS-IGIKVNYLGEDQHFGPEQLTAMLFTKLKETSAAA 132
            ||:||:|:||.||.::...|.:|.:  ||| ..::|.|.||.:.|.||::::|:.||:||.|.|.
Zfish    72 RLIGRRFDDPVVQSDMKHWPFKVIS--DGSKPKMEVEYKGEIKTFFPEEVSSMVLTKMKEISEAY 134

  Fly   133 MQTQVNDCVIACPVFFTNAERKALLDAAQIAGLNVLRLMNETTATALAYGFYKNDLFEDKPRNVI 197
            :...|::.||..|.:|.:::|:|..||..||||||||::||.||.|:|||..|....|   |||:
Zfish   135 LGKTVSNAVITVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGGE---RNVL 196

  Fly   198 FVDFGHSSLQASACAFTKGKLKMLASTWD-QIGGRDIDLALGDYFAKEFQERYKINAKTNARANL 261
            ..|.|..:...|......|..::.::..| .:||.|.|..:.::|..||:.::|.:...|.||..
Zfish   197 IFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFITEFKRKFKKDITGNKRAVR 261

  Fly   262 RLLTEIEKLKKQMSANSTKLPLNIECFLDDIDVSSSMQRSQMEELCAPVLQRVEQTFKRLLAESK 326
            ||.|..|:.|:.:| :||:..:.|:...:..|..:|:.|::.|||.|.:.:...:..::.|.::|
Zfish   262 RLRTACERAKRTLS-SSTQASIEIDSLYEGADFYTSITRARFEELNADLFRGTLEPVEKALRDAK 325

  Fly   327 LQLDDIHSVEIVGGSSRIPSVKQLIEQVFN-KPASTTLNQDEAVSRGAALQCAIMS--PAVRVRE 388
            :....||.:.:||||:|||.:::|::..|| :..:.::|.||||:.|||:|.||::  .:..|::
Zfish   326 MDKAQIHDIVLVGGSTRIPKIQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILTGDTSENVQD 390

  Fly   389 FGVTDIQNYAVKVLWDSEGSAAPGEIEIFPQYHAS-PFSRLLTI-----NRKGPFNVSIVYGQQV 447
            ..:.|:...::.:      ..|.|.:.:..:.:.: |..:..|.     |:.|.. :.:..|::.
Zfish   391 LLLLDVTPLSLGI------ETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVL-IQVYEGERA 448

  Fly   448 PYPDQTI-GVWKVKDVKPTERGEGQDVKLKVRINNNGIVLISSATLVEKKEAEEAAAAAEQAASE 511
            ...|..| |.:::..:.|..||..| :::...|:.|||:.:|               |.:::..:
Zfish   449 MTKDNNILGKFELTGIPPAPRGVPQ-IEVTFDIDANGILNVS---------------AVDKSTGK 497

  Fly   512 EKPGDQTNNTGEPADGQQEAYCENEDDNNTSTASSPGGQGWAQRVKGWFGSGADKKKKASKATEL 576
            |.....||:.|.                                                     
Zfish   498 ENKITITNDKGR----------------------------------------------------- 509

  Fly   577 PLECTTHGFSPVDLSNYTQQESKMIGNDQKETERIDAKNALEEFVYDMRNKLQGGPFERYVVEAE 641
                    .|..|:....|:..:....|:.:.|::.|||.||...::|::.::....:..:...:
Zfish   510 --------LSKEDIERMVQEADQYRAEDEVQREKVTAKNTLESLAFNMKSTVEDDKLQDKISPED 566

  Fly   642 REKIVSQLNDLENWLYEDGEDCERDIYTSRLQALHQKTDPI 682
            ::.|..:.|::.:|| :..:..|:|.|..:.:.|.:..:||
Zfish   567 KKTITDKCNEVISWL-DKNQTAEKDEYEHQQKELEKVCNPI 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70CbNP_001189103.1 HSPA4_like_NDB 2..381 CDD:212670 145/379 (38%)
HSP70 3..682 CDD:278441 190/689 (28%)
hsc70NP_956908.1 PTZ00009 1..612 CDD:240227 192/691 (28%)
HSPA1-2_6-8-like_NBD 6..381 CDD:212675 145/379 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592206
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.740

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