DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp110 and F11F1.1

DIOPT Version :10

Sequence 1:NP_001189103.1 Gene:Hsp110 / 39557 FlyBaseID:FBgn0026418 Length:836 Species:Drosophila melanogaster
Sequence 2:NP_001255199.1 Gene:F11F1.1 / 3565569 WormBaseID:WBGene00008714 Length:607 Species:Caenorhabditis elegans


Alignment Length:530 Identity:146/530 - (27%)
Similarity:259/530 - (48%) Gaps:39/530 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IGIDFGNESCYVAAARSGGIETLANDYSLRATPSFVAF--DGKKRIIGVAAKNQQVTNMKNTVGG 66
            ||||.|.....||..::|.:..|.|:...|.|||.:|.  || ..:||..||: .:....|::..
 Worm     3 IGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDG-DLLIGQHAKD-VIGKATNSLFD 65

  Fly    67 FKRLLGRKFNDPHVQHELTSIPARVEARGDGSIGIKVNYLGEDQHFGPEQLTAMLFTKLKETSAA 131
            .||::||:::|..:|.::...|.:||...:|...::::...:...|....:::::...||..:..
 Worm    66 VKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLILRCLKYNAER 130

  Fly   132 AMQTQVNDCVIACPVFFTNAERKALLDAAQIAGLNVLRLMNETTATALAYGFYKNDLFEDKPRNV 196
            .:..:|...||..|.:|...:|:|..:||:||||.|||::||.||.|:||......|   ..||:
 Worm   131 KLGLEVKSAVITVPAYFNATQRRATEEAAEIAGLKVLRILNEPTAAAIAYSLKGQRL---SRRNI 192

  Fly   197 IFVDFGHSSLQASACAFTKGKLKMLASTWD-QIGGRDIDLALGDYFAKEFQERYKINAKTNARAN 260
            :..|.|..:...:|......::.:.|...| .:||:|||..:.....:||:.|:.|:.|.|.||.
 Worm   193 LIYDLGGGTFDVAAVNVDGPRITVKAKGGDTHLGGQDIDNIIMIKMLEEFKNRHGIDLKGNYRAL 257

  Fly   261 LRLLTEIEKLKKQMSANSTKLPLNIECFLDDIDVSSSMQRSQMEELCAPVLQRVEQTFKRLLAES 325
            .|:....|..|..:||:|. ..:.:||....||....:.|:..|.....:|.......:|::.|:
 Worm   258 KRIRKAAEVAKITLSASSV-ARIELECLHLGIDFIMRISRTDFESWIENLLMATVIHVERVIREA 321

  Fly   326 KLQLDDIHSVEIVGGSSRIPSVKQLIEQVF--NKPASTTLNQDEAVSRGAALQCAIMSPAVRVRE 388
            .|:...|:.:.:||||:|||.:|.:|:|.|  |.....:::.||||:.|||:..|::|.|..|::
 Worm   322 NLKKSQINEIVLVGGSTRIPILKNIIKQSFESNTRICESIHPDEAVAYGAAIMAAVLSGAEEVQD 386

  Fly   389 FGVTDIQNYAVKVLWDSE-GSAAPGEIEIFPQYHASPFSRLLTINR---KGPFNVSIVYGQQVPY 449
            ..:.|:...::.|..:.: .|....:..:||......|     ||.   :...||.:..|::|..
 Worm   387 MRLIDVIPMSIGVQCNRDYMSVLIKKGTVFPCTKRKTF-----INSDDFQTSINVPVYEGERVLC 446

  Fly   450 P-DQTIGVWKVKDVKPTERGEGQDVKLKVRINNNGIVLISSATLVEKK----------------E 497
            . ::.:|...: .::|..|||.. |.:.:.::.|||:..::..|..||                |
 Worm   447 SHNRQLGEISL-PIQPKRRGESV-VDITLEVDYNGILQATALDLNTKKAITTTILYDCCTYTQPE 509

  Fly   498 AEEAAAAAEQ 507
            .:|..:.:|:
 Worm   510 IDEMTSQSEE 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp110NP_001189103.1 ASKHA_NBD_HSP70_HSPA4_like 4..378 CDD:466826 115/378 (30%)
F11F1.1NP_001255199.1 ASKHA_NBD_HSP70_HSPA1-like 2..378 CDD:466878 116/380 (31%)

Return to query results.
Submit another query.