DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsc70Cb and Hsc70-3

DIOPT Version :9

Sequence 1:NP_001189103.1 Gene:Hsc70Cb / 39557 FlyBaseID:FBgn0026418 Length:836 Species:Drosophila melanogaster
Sequence 2:NP_001285139.1 Gene:Hsc70-3 / 32133 FlyBaseID:FBgn0001218 Length:656 Species:Drosophila melanogaster


Alignment Length:700 Identity:192/700 - (27%)
Similarity:334/700 - (47%) Gaps:118/700 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SVIGIDFGNESCYVAAARSGGIETLANDYSLRATPSFVAF--DGKKRIIGVAAKNQQVTNMKNTV 64
            :|||||.|.....|...::|.:|.:|||...|.|||:|||  || :|:||.|||||..||.:|||
  Fly    30 TVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTADG-ERLIGDAAKNQLTTNPENTV 93

  Fly    65 GGFKRLLGRKFNDPHVQHELTSIPARVEARG-------DGSIGIKVNYLGEDQHFGPEQLTAMLF 122
            ...|||:||:::|.:|||::...|.:|..:.       |.|.|.||        |.||:::||:.
  Fly    94 FDAKRLIGREWSDTNVQHDIKFFPFKVVEKNSKPHISVDTSQGAKV--------FAPEEISAMVL 150

  Fly   123 TKLKETSAAAMQTQVNDCVIACPVFFTNAERKALLDAAQIAGLNVLRLMNETTATALAYGFYKND 187
            .|:|||:.|.:..:|...|:..|.:|.:|:|:|..||..||||.|:|::||.||.|:|||..|  
  Fly   151 GKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIAGLQVMRIINEPTAAAIAYGLDK-- 213

  Fly   188 LFEDKPRNVIFVDFGHSSLQASACAFTKGKLKMLASTWD-QIGGRDIDLALGDYFAKEFQERYKI 251
              ::..:||:..|.|..:...|......|..:::|:..| .:||.|.|..:.|:|.|.::::...
  Fly   214 --KEGEKNVLVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMDHFIKLYKKKKGK 276

  Fly   252 NAKTNARANLRLLTEIEKLKKQMSANSTKLPLNIECFLDDIDVSSSMQRSQMEELCAPVLQRVEQ 316
            :.:.:.||..:|..|:||.|:.:| .|.::.:.||.|.:..|.|.::.|::.|||...:.:...:
  Fly   277 DIRKDNRAVQKLRREVEKAKRALS-GSHQVRIEIESFFEGDDFSETLTRAKFEELNLDLFRSTLK 340

  Fly   317 TFKRLLAESKLQLDDIHSVEIVGGSSRIPSVKQLIEQVF-NKPASTTLNQDEAVSRGAALQCAIM 380
            ..:::|.::.:...|:|.:.:||||:|||.|:||::..| .|..|..:|.||||:.|||:|..::
  Fly   341 PVQKVLEDADMNKKDVHEIVLVGGSTRIPKVQQLVKDFFGGKEPSRGINPDEAVAYGAAVQAGVL 405

  Fly   381 SPAVRVREFGVTDIQNYAVKVLWDSEGSAAPGEIEIFPQYHASPF--SRLLTINRKGPFNVSI-V 442
            |.........:.|:....:.:  ::.|...   .::.|:....|.  |::.:........|:| |
  Fly   406 SGEQDTDAIVLLDVNPLTMGI--ETVGGVM---TKLIPRNTVIPTKKSQVFSTASDNQHTVTIQV 465

  Fly   443 YGQQVPY--PDQTIGVWKVKDVKPTERGEGQDVKLKVRINNNGIVLISSATLVEKKEAEEAAAAA 505
            |..:.|.  .:..:|.:.:..:.|..||..| :::...|:.|||:                    
  Fly   466 YEGERPMTKDNHLLGKFDLTGIPPAPRGIPQ-IEVSFEIDANGIL-------------------- 509

  Fly   506 EQAASEEKPGDQTNNTGEPADGQQEAYCENEDDNNTSTASSPGGQGWAQRVKGWFGSGADKKKKA 570
             |.::|:|           ..|.:|......|.|.                              
  Fly   510 -QVSAEDK-----------GTGNKEKIVITNDQNR------------------------------ 532

  Fly   571 SKATELPLECTTHGFSPVDLSNYTQQESKMIGNDQKETERIDAKNALEEFVYDMRNKLQGGPFER 635
                          .:|.|:....:...|....|:|..||::::|.||.:.|.::|::  |..::
  Fly   533 --------------LTPEDIDRMIRDAEKFADEDKKLKERVESRNELESYAYSLKNQI--GDKDK 581

  Fly   636 Y---VVEAEREKIVSQLNDLENWLYEDGEDCERDIYTSRLQALHQKTDPI 682
            .   :.:.|:.|:.|.:::...|| |...|.:.:.|..:.:.|.....|:
  Fly   582 LGAKLSDDEKNKLESAIDESIKWL-EQNPDADPEEYKKQKKDLEAIVQPV 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70CbNP_001189103.1 HSPA4_like_NDB 2..381 CDD:212670 142/389 (37%)
HSP70 3..682 CDD:278441 191/697 (27%)
Hsc70-3NP_001285139.1 HSPA5-like_NBD 29..403 CDD:212681 142/386 (37%)
PTZ00009 32..643 CDD:240227 191/697 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464206
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.