DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70Cb and hsp-6

DIOPT Version :9

Sequence 1:NP_001189103.1 Gene:Hsc70Cb / 39557 FlyBaseID:FBgn0026418 Length:836 Species:Drosophila melanogaster
Sequence 2:NP_001370558.1 Gene:hsp-6 / 178873 WormBaseID:WBGene00002010 Length:657 Species:Caenorhabditis elegans


Alignment Length:727 Identity:190/727 - (26%)
Similarity:315/727 - (43%) Gaps:147/727 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VIGIDFGNESCYVAAARSGGIETLANDYSLRATPSFVAF--DGKKRIIGVAAKNQQVTNMKNTVG 65
            |||||.|..:..|:.......:.:.|...:|.|||.|||  || :|::|..||.|.|||..||:.
 Worm    33 VIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADG-ERLVGAPAKRQAVTNSANTLF 96

  Fly    66 GFKRLLGRKFNDPHVQHELTSIPARVEARGDGSIGIKVNYLGEDQHFGPEQLTAMLFTKLKETSA 130
            ..|||:||::.||.||.:|..:|.::....:|...::    .:.:.:.|.|:.|.:..|:|||:.
 Worm    97 ATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVE----AQGKVYSPSQVGAFVLMKMKETAE 157

  Fly   131 AAMQTQVNDCVIACPVFFTNAERKALLDAAQIAGLNVLRLMNETTATALAYGFYKNDLFEDKPRN 195
            :.:.|.||:.|:..|.:|.:::|:|..||.||:||||||::||.||.|||||     |.:|....
 Worm   158 SYLGTTVNNAVVTVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYG-----LDKDAGDK 217

  Fly   196 VIFV-DFGHSSLQASACAFTKGKLKMLASTWDQ-IGGRDIDLALGDYFAKEFQERYKINAKTNAR 258
            :|.| |.|..:...|.....||..::.::..|. :||.|.|.||..:...||::...::...:.:
 Worm   218 IIAVYDLGGGTFDVSILEIQKGVFEVKSTNGDTFLGGEDFDHALVHHLVGEFKKEQGVDLTKDPQ 282

  Fly   259 ANLRLLTEIEKLKKQMSANSTKLPLNIECFLDDID----VSSSMQRSQMEELCAPVLQRVEQTFK 319
            |..||....||.|.::| ::|:..:|:.....|..    ::..:.|::.|::...:::|..:..:
 Worm   283 AMQRLREAAEKAKCELS-STTQTDINLPYITMDQSGPKHLNLKLTRAKFEQIVGDLIKRTIEPCR 346

  Fly   320 RLLAESKLQLDDIHSVEIVGGSSRIPSVKQLIEQVFNKPASTTLNQDEAVSRGAALQCAIMSPAV 384
            :.|.:::::...|..|.:|||.||:|.|:..::::|.|..|..:|.||||:.|||:|.|:::.  
 Worm   347 KALHDAEVKSSQIADVLLVGGMSRMPKVQATVQEIFGKVPSKAVNPDEAVAMGAAIQGAVLAG-- 409

  Fly   385 RVREFGVTDIQNYAVKVLWDSEGSAAPGEIEIFPQYHASPFSRLLTINRKGPFNVSIVY-----G 444
                 .|||:....|..|  |.|....|.|          .::|:|.|...|...|.|:     |
 Worm   410 -----DVTDVLLLDVTPL--SLGIETLGGI----------MTKLITRNTTIPTKKSQVFSTAADG 457

  Fly   445 Q------------QVPYPDQTIGVWKVKDVKPTERGEGQDVKLKVRINNNGIVLISSATLVEKKE 497
            |            ::...::.:|.:.:..:.|..||..| |::...|:.||||.:|         
 Worm   458 QTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVPQ-VEVTFDIDANGIVNVS--------- 512

  Fly   498 AEEAAAAAEQAASEEKPGDQTNNTGEPADGQQEAYCENEDDNNTSTASSPGGQGWAQRVKGWFGS 562
            |.:.....||....:..|                                               
 Worm   513 ARDRGTGKEQQIVIQSSG----------------------------------------------- 530

  Fly   563 GADKKKKASKATELPLECTTHGFSPVDLSNYTQQESKMIGNDQKETERIDAKNALEEFVYDMRNK 627
                                 |.|...:.|..::..|....|.|..|.::..|..|..::|...|
 Worm   531 ---------------------GLSKDQIENMIKEAEKNAAEDAKRKELVEVINQAEGIIHDTEAK 574

  Fly   628 LQ--GGPFERYVVEAEREKIVSQLNDLENWLYEDGEDCERDIYTSRLQALHQKTDPIKLRASDYE 690
            :.  .....:...||.|.||......|:|...|..|..:....|.:.|:|       ||..:.|:
 Worm   575 MTEFADQLPKDECEALRTKIADTKKILDNKDNETPEAIKEACNTLQQQSL-------KLFEAAYK 632

  Fly   691 QGPAAFDELKNS 702
            ...|     |||
 Worm   633 NMAA-----KNS 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70CbNP_001189103.1 HSPA4_like_NDB 2..381 CDD:212670 127/385 (33%)
HSP70 3..682 CDD:278441 183/705 (26%)
hsp-6NP_001370558.1 dnaK 30..646 CDD:234715 190/727 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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