DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70Cb and hsp-110

DIOPT Version :9

Sequence 1:NP_001189103.1 Gene:Hsc70Cb / 39557 FlyBaseID:FBgn0026418 Length:836 Species:Drosophila melanogaster
Sequence 2:NP_498868.1 Gene:hsp-110 / 176195 WormBaseID:WBGene00016250 Length:776 Species:Caenorhabditis elegans


Alignment Length:831 Identity:337/831 - (40%)
Similarity:478/831 - (57%) Gaps:66/831 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSVIGIDFGNESCYVAAARSGGIETLANDYSLRATPSFVAFDGKKRIIGVAAKNQQVTNMKNTVG 65
            |||:|.|.||.:||:..||.||||.:.|||||.|||:.|:|..|.|.:||||:....||:||||.
 Worm     1 MSVLGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAVTTNIKNTVI 65

  Fly    66 GFKRLLGRKFNDPHVQHELTSIPARVEARGDGSIGIKVNYLGEDQHFGPEQLTAMLFTKLKETSA 130
            .||.|:||||:||..|..:..||.:|....:..||::|:||||...|.|||:.|.|.|||:....
 Worm    66 NFKHLIGRKFSDPVAQRFIPFIPCKVVKLPNDDIGVQVSYLGEPHTFTPEQVLAALLTKLRTIVE 130

  Fly   131 AAMQ--TQVNDCVIACPVFFTNAERKALLDAAQIAGLNVLRLMNETTATALAYGFYKNDLFED-- 191
            :.:.  .:|:|||:|.|.:||:.:|:|:|.|.|.||||.||::|||||.|||||.||.||.|:  
 Worm   131 SQLSDVKKVSDCVLAVPSYFTDVQRRAVLSAIQYAGLNSLRIVNETTAIALAYGIYKQDLPEEDA 195

  Fly   192 KPRNVIFVDFGHSSLQASACAFTKGKLKMLASTWD-QIGGRDIDLALGDYFAKEFQERYKINAKT 255
            |.|||:|:|.||||.|||..||.:|||:|:.:::| :.||...|..:.::|.|||:.:|.|:|.|
 Worm   196 KSRNVVFLDIGHSSTQASLVAFNRGKLQMVNTSYDLESGGIWFDALIREHFRKEFKTKYGIDAAT 260

  Fly   256 NARANLRLLTEIEKLKKQMSANSTKLPLNIECFLDDIDVSSSMQRSQMEELCAPVLQRVEQTFKR 320
            :.|..||||.|.|::|||||||.|.:|||||||::|.||:..|||.:.|:|.||:..|::|....
 Worm   261 SPRPWLRLLDECERVKKQMSANQTPIPLNIECFMEDKDVTGKMQRQEFEDLAAPIFNRIKQVLIN 325

  Fly   321 LLAES-KLQLDDIHSVEIVGGSSRIPSVKQLIEQVFNKPASTTLNQDEAVSRGAALQCAIMSPAV 384
            |.|:. .::.::|..:||||||||||.::::::.:|.|...||:||||||:||||:||||:||..
 Worm   326 LFADGVSIKPEEIDEIEIVGGSSRIPMIREIVKDLFGKEPKTTMNQDEAVARGAAMQCAILSPTF 390

  Fly   385 RVREFGVTDIQNYAVKVLWDSEGSAAPGEIEIFPQYHASPFSRLLTINRKGPFNVSIVYGQQ--V 447
            |||||.:.|.|.|.:::.|:|.|... ||.::|......|||:|:::.|.|||||...|.|.  |
 Worm   391 RVREFAIKDTQPYRIRLSWNSTGENG-GENDVFSPRDEVPFSKLVSLLRSGPFNVEAHYAQPNVV 454

  Fly   448 PYPDQTIGVWKVKDVKPTERGEGQDVKLKVRINNNGIVLISSATLVEKKEAEEAAAAAEQAASEE 512
            |:....||.|||...:|...|..|.||:|||:|.:||..|:|||:.|.:..||..|.|.:...:.
 Worm   455 PHNQVHIGSWKVNGARPGADGGNQKVKVKVRVNPDGIFTIASATMYEPRIVEEVPAEAMEVDGDA 519

  Fly   513 KPGDQTNNTGEPADGQQEAYCENEDDNNTSTASSPGGQGWAQRVKGWFGSGADKKKKASKATELP 577
            |       |..||:..:..                                  ||.|.     :|
 Worm   520 K-------TEAPAEPLEPV----------------------------------KKTKL-----VP 538

  Fly   578 LECTTHGFSPV--DLSNYTQQESKMIGNDQKETERIDAKNALEEFVYDMRNKLQGGPFERYVVEA 640
            ::.......||  |:..:...|.:|..:|.:|..:.||||:|||:||:||:|: ...:..::..|
 Worm   539 VDLEVIESIPVSYDVQKFHNLELQMQESDAREKAKADAKNSLEEYVYEMRDKV-SDQYAEFITPA 602

  Fly   641 EREKIVSQLNDLENWLYEDGEDCERDIYTSRLQALHQKTDPIKLRASDYEQGPAAFDELKNSIAI 705
            ..::..|.|...|:|||::|||.|||:|..||..|.....|:..|..:.|....|||....||..
 Worm   603 AADEFRSVLTSTEDWLYDEGEDAERDVYEKRLSELKAVGTPVVERYRESETRKPAFDSFDQSIMR 667

  Fly   706 ARLAVAEFRKGVPKYDHLTETEFINISETADKAQSWLDANLPKFTQSPRTADSPVQIS-AVRQEV 769
            .|.|..::..|.|.|.||...|...:....:..:.|||....|.....:| |:||..: .:.|..
 Worm   668 VRKAYEDYANGGPTYAHLDSKEMEKVINAIEDKKKWLDEARHKQETRSKT-DAPVVFTEEILQNK 731

  Fly   770 QTLNSCVSSVINRAKPKPTPAKTATPPKDEANAEQNGGEPAANSGDKMDVD 820
            ....:.|:.::|:.|| ..||    |||.|......|.:|.:..|: ||||
 Worm   732 NVFENVVNPILNKKKP-AAPA----PPKKEEPQPAAGDQPQSQPGE-MDVD 776

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70CbNP_001189103.1 HSPA4_like_NDB 2..381 CDD:212670 195/384 (51%)
HSP70 3..682 CDD:278441 293/688 (43%)
hsp-110NP_498868.1 HSPA4_like_NDB 2..387 CDD:212670 195/384 (51%)
HSP70 3..650 CDD:278441 295/694 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167622
Domainoid 1 1.000 524 1.000 Domainoid score I146
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1624
Inparanoid 1 1.050 576 1.000 Inparanoid score I559
Isobase 1 0.950 - 0 Normalized mean entropy S1071
OMA 1 1.010 - - QHG54058
OrthoDB 1 1.010 - - D285748at33208
OrthoFinder 1 1.000 - - FOG0001023
OrthoInspector 1 1.000 - - oto17551
orthoMCL 1 0.900 - - OOG6_100680
Panther 1 1.100 - - LDO PTHR45639
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R574
SonicParanoid 1 1.000 - - X684
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1716.790

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