DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsc70Cb and F44E5.5

DIOPT Version :9

Sequence 1:NP_001189103.1 Gene:Hsc70Cb / 39557 FlyBaseID:FBgn0026418 Length:836 Species:Drosophila melanogaster
Sequence 2:NP_496510.1 Gene:F44E5.5 / 174806 WormBaseID:WBGene00009692 Length:645 Species:Caenorhabditis elegans


Alignment Length:657 Identity:189/657 - (28%)
Similarity:318/657 - (48%) Gaps:91/657 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IGIDFGNESCYVAAARSGGIETLANDYSLRATPSFVAFDGKKRIIGVAAKNQQVTNMKNTVGGFK 68
            ||||.|.....|...::|.:|.|||....:.|||:|||...:|::|.|||:|...|.:|||...|
 Worm     7 IGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAARNPENTVFDAK 71

  Fly    69 RLLGRKFNDPHVQHELTSIPARVEARGDGSIGIKVNYLGEDQHFGPEQLTAMLFTKLKETSAAAM 133
            ||:||:|::..||.:....|..|:.: .|...|:|...||.:.|.||:::||:..|:|||:...:
 Worm    72 RLIGRRFDESTVQSDCKHWPFGVKGK-QGKPVIEVEVKGEKRQFNPEEISAMVLQKMKETAETYL 135

  Fly   134 QTQVNDCVIACPVFFTNAERKALLDAAQIAGLNVLRLMNETTATALAYGFYKNDLFEDKPRNVIF 198
            ...|.|.||..|.:|.:::|:|..|||.|||||.:|::||.||.|||||..|.  .:|: :||:.
 Worm   136 GHTVKDAVITVPAYFNDSQRQATKDAATIAGLNAIRIINEPTAAALAYGLDKG--IQDE-KNVLI 197

  Fly   199 VDFGHSSLQASACAFTKGKLKMLASTW--DQIGGRDIDLALGDYFAKEFQERYKINAKTNARANL 261
            .|.|..:...|..:..:|.:..:.||.  ..:||.|.|..:..:|..||:.:...:...|.||..
 Worm   198 FDLGGGTFDVSILSIAEGSIFEVKSTAGDTHLGGEDFDQRMLQHFMNEFKRKTGKDISPNPRAIR 262

  Fly   262 RLLTEIEKLKKQMSANSTKLPLNIECFLDDIDVSSSMQRSQMEELCAPVLQRVEQTFKRLLAESK 326
            ||.|..|:.|:.:| :|::..:.::...:.||:.:.:.|::.|||||.:.::..:..::.|.::|
 Worm   263 RLRTACERAKRTLS-SSSEACVEVDSLFEGIDLCTKITRARFEELCADLFRKTLEPVEKALRDAK 326

  Fly   327 LQLDDIHSVEIVGGSSRIPSVKQLIEQVFN-KPASTTLNQDEAVSRGAALQCAIMSPAVRVREFG 390
            |....|..|.:||||:|:|.:::|::..|| |..:.::|.||||:.|||:|.|::|   .|::..
 Worm   327 LDKSKIDEVVLVGGSTRVPKIQKLLKDFFNGKELNCSINPDEAVAFGAAVQAAVLS---GVKDET 388

  Fly   391 VTDIQNYAVKVLWDSEGSAAPGEIEIFPQYHASPFSRLLTINRKGP----------------FNV 439
            :.|:....|..|  |.|....|.:          .:.|:..|.:.|                .::
 Worm   389 IKDVLLVDVAPL--SLGIETAGGV----------MTNLIDRNTRIPTKACKTFTTYADNQPGVSI 441

  Fly   440 SIVYGQQVPYPD-QTIGVWKVKDVKPTERGEGQDVKLKVRINNNGIVLISS----------ATLV 493
            .:..|::....| ..:|.:::..:.|..||..| :::...|:.|||:.:|:          .|:.
 Worm   442 QVYEGERAMTRDNHRLGTFELSGIPPAPRGVPQ-IEVTFDIDANGILNVSAEDKSTGKSNRITIQ 505

  Fly   494 EKK----EAEEAAAAAEQAASEEKPGDQTNNTGEPADGQQEAY------CENEDDNNTSTASSPG 548
            .:|    :::......|....|::.|:|....  .|..|.|||      ..:|..:..||..:..
 Worm   506 NEKGRLTQSDIDRMVHEAKQFEKEDGEQRERV--QARNQLEAYAFQIKQALDEYSSKLSTEDASR 568

  Fly   549 GQGWAQRVKGWFGSG--ADKKKKASKATELPLECT-----------------------THGFSPV 588
            .:........|..|.  |:|.:..:|..||...|.                       |.||:| 
 Worm   569 AKEAVDETLRWLDSNSLAEKDEIEAKDKELKSVCQSILTKMHQSGQSSASAGCAGNPGTAGFNP- 632

  Fly   589 DLSNYTQ 595
              :||.|
 Worm   633 --NNYPQ 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70CbNP_001189103.1 HSPA4_like_NDB 2..381 CDD:212670 137/379 (36%)
HSP70 3..682 CDD:278441 189/657 (29%)
F44E5.5NP_496510.1 PTZ00009 1..645 CDD:240227 189/657 (29%)
HSPA1-2_6-8-like_NBD 6..382 CDD:212675 137/379 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.