DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70Cb and stc-1

DIOPT Version :9

Sequence 1:NP_001189103.1 Gene:Hsc70Cb / 39557 FlyBaseID:FBgn0026418 Length:836 Species:Drosophila melanogaster
Sequence 2:NP_495808.2 Gene:stc-1 / 174368 WormBaseID:WBGene00006059 Length:450 Species:Caenorhabditis elegans


Alignment Length:418 Identity:111/418 - (26%)
Similarity:196/418 - (46%) Gaps:39/418 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VIGIDFGN--ESCYVAAARSGGIETLANDYSLRATPSFVAF--DGKKRIIGVAAKNQQVTNMKNT 63
            :.|||.|.  .|..:..|.:|....|.:|...::.||.|||  :|.. :||..|..||..|.|.|
 Worm    35 IAGIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTV-LIGTRATEQQEHNPKRT 98

  Fly    64 VGGFKRLLGRKF--NDPHVQHELTSIPARVEARGDGSIGIKVNYLGEDQHFGPEQLTAMLFTKLK 126
            :...||.:||.|  |:.....:....|.::....:|....::......::..||::.:::...||
 Worm    99 IYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIPLDSGTKNVYPEEIGSLIIGYLK 163

  Fly   127 ETSAAAMQTQVNDCVIACPVFFTNAERKALLDAAQIAGLNVLRLMNETTATALAYGFYKNDLFED 191
            ..:|..:...:...||:||..|...:|.....||:||.:.|.|:::|.||.|||||.:|....| 
 Worm   164 SAAAKHLGVTLGQVVISCPAEFNEKQRNFTAKAAEIAEMEVRRVISEPTAAALAYGLHKKQGVE- 227

  Fly   192 KPRNVIFVDFGHSSLQASACAFTKGKLKMLASTW-DQIGGRDIDLALGDYFAKEFQERYKINAKT 255
               ||:.||.|..:|..|......|.....|... :::||:|.:..:..:...:..|::   .||
 Worm   228 ---NVVVVDLGGGTLDVSVLWLQGGVFVTQAMAGNNRLGGQDFNDRVQKHLISKIAEKF---GKT 286

  Fly   256 --NARANLRLLTEIEKLKKQM-SANSTKLPLNIECFLDDIDVSS---SMQRSQMEELCAPVLQRV 314
              |.....::..|:||.|.:: :..||.:.||::      .|..   .:.|.:.|.|...:|:.:
 Worm   287 IDNKEDIQQIRMEVEKGKIRLTNVPSTTISLNLK------TVGKWNYELTRDEFETLNGDLLKAI 345

  Fly   315 EQTFKRLLAESKLQLDDIHSVEIVGGSSRIPSVKQLIEQVFNKPASTTLNQDEAVSRGAALQCAI 379
            |......||::.|...|:..:.:||||:::|:|::::.:.|.|.|:..::.:.||..||::|..:
 Worm   346 ELPITAALADANLDTADVDEIVLVGGSTQVPAVRKIVGRFFKKSANYGVDPELAVVTGASVQAGV 410

  Fly   380 MS------------PAVRVREFGVTDIQ 395
            :.            ||.|.:....|:.|
 Worm   411 IGGGWPLQVAAMELPAKRRKRHFFTEEQ 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70CbNP_001189103.1 HSPA4_like_NDB 2..381 CDD:212670 106/390 (27%)
HSP70 3..682 CDD:278441 111/418 (27%)
stc-1NP_495808.2 HSPA13-like_NBD 13..427 CDD:212679 107/405 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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