DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70Cb and hsp-70

DIOPT Version :9

Sequence 1:NP_001189103.1 Gene:Hsc70Cb / 39557 FlyBaseID:FBgn0026418 Length:836 Species:Drosophila melanogaster
Sequence 2:NP_492485.1 Gene:hsp-70 / 172757 WormBaseID:WBGene00002026 Length:643 Species:Caenorhabditis elegans


Alignment Length:730 Identity:193/730 - (26%)
Similarity:330/730 - (45%) Gaps:139/730 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IGIDFGNESCYVAAARSGGIETLANDYSLRATPSFVAFDGKKRIIGVAAKNQQVTNMKNTVGGFK 68
            ||||.|.....|...::|.:|.|||....:.|||:|||...:|::|.|||:|...|.:|||...|
 Worm     7 IGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAARNPENTVFDAK 71

  Fly    69 RLLGRKFNDPHVQHELTSIPARVEARGDGSIGIKVNYLGEDQHFGPEQLTAMLFTKLKETSAAAM 133
            ||:||:|::..||.::...|..|:.: .|...::|...||.:.|..|:::||:..|:|||:.|.:
 Worm    72 RLIGRRFDEETVQSDIKHWPFTVKGK-QGKPVVEVEVKGEKREFNAEEISAMVLQKMKETAEAVL 135

  Fly   134 QTQVNDCVIACPVFFTNAERKALLDAAQIAGLNVLRLMNETTATALAYGFYKNDLFEDKPRNVIF 198
            ...|.|.||..|.:|.:::|:|..|||.|||||.:|::||.||.|||||..|....|   :|::.
 Worm   136 GHSVRDAVITVPAYFNDSQRQATKDAATIAGLNAIRIINEPTAAALAYGLDKGITDE---KNILI 197

  Fly   199 VDFGHSSLQASACAFTKGKLKMLASTW--DQIGGRDIDLALGDYFAKEFQERYKINAKTNARANL 261
            .|.|..:...|..:..:|.:..:.||.  ..:||.|.|..:..:|..||:.:...:..:|.||..
 Worm   198 FDLGGGTFDVSILSIAEGSIFEVKSTAGDTHLGGEDFDSRVLQHFMTEFKRKTGKDISSNPRAIR 262

  Fly   262 RLLTEIEKLKKQMSANSTKLPLNIECFLDDIDVSSSMQRSQMEELCAPVLQRVEQTFKRLLAESK 326
            ||.|..|:.|:.:| :||:..:.::...|..|..|.:.|::.|||||.:.::..:..::.|.::|
 Worm   263 RLRTACERAKRTLS-SSTEATVEVDSLFDGTDFYSKITRARFEELCADLFRKTLEPVEKALRDAK 326

  Fly   327 LQLDDIHSVEIVGGSSRIPSVKQLIEQVFN-KPASTTLNQDEAVSRGAALQCAIMSPAVRVREFG 390
            .....|..|.:||||:|||.:::|:::.|| |..:.::|.||||:.|||:|.|::|   .|::..
 Worm   327 TDKGRIDEVVLVGGSTRIPKIQKLLKEFFNGKDLNCSINPDEAVAFGAAVQAAVLS---GVKDDT 388

  Fly   391 VTDIQNYAVKVLWDSEGSAAPGEIEIFPQYHASPFSRLLTINRKGP----------------FNV 439
            :.|:  ..|.|:..|.|....|.:          .:.|:..|.:.|                .::
 Worm   389 IKDV--LLVDVVPLSHGIETAGGV----------MTNLIDRNTRIPAKASKTFTTYADNQPGVSI 441

  Fly   440 SIVYGQQVPYPD-QTIGVWKVKDVKPTERGEGQDVKLKVRINNNGIVLISSATLVEKKEAEEAAA 503
            .:..|::....| ..:|.:::..:.|..||..| |.:...|:.|||:.:|:|             
 Worm   442 QVYEGERAMTRDNHRLGTFELTGIPPAPRGVPQ-VDVTFDIDANGILNVSAA------------- 492

  Fly   504 AAEQAASEEKPGDQTNNTGEPADGQQEAYCENEDDNNTSTASSPGGQGWAQRVKGWFGSGADKKK 568
                          ..:||.               :|..|..:..|:                  
 Worm   493 --------------DKSTGR---------------SNRITIRNEKGR------------------ 510

  Fly   569 KASKATELPLECTTHGFSPVDLSNYTQQESKMIGNDQKETERIDAKNALEEFVYDMRNKLQGGPF 633
                            .|..|:.....:..:....|..:.:||.::|.||.:.:.::..|:....
 Worm   511 ----------------LSQADIDRMVNEAKQFEREDAAQRDRISSRNQLEAYAFQVKQALEEHGS 559

  Fly   634 ERYVVEAEREKIVSQLNDLENWL----YEDGEDCE------RDIYTSRLQALHQKT--------D 680
            .....:|:|.|  ..:.|...|:    ..|.::.|      :.|....|..:||:.        :
 Worm   560 LLSAEDAKRAK--DAVEDTLRWMERNTLADKDEIEAKDKELKSICQDILTKMHQQEAQSGSGCGN 622

  Fly   681 PIK--LRASDYEQGP 693
            |..  ..:|:|.|||
 Worm   623 PGSGGFHSSNYPQGP 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70CbNP_001189103.1 HSPA4_like_NDB 2..381 CDD:212670 137/379 (36%)
HSP70 3..682 CDD:278441 187/715 (26%)
hsp-70NP_492485.1 PTZ00009 1..643 CDD:240227 193/730 (26%)
HSPA1-2_6-8-like_NBD 6..382 CDD:212675 137/379 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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