DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70Cb and Hspa13

DIOPT Version :9

Sequence 1:NP_001189103.1 Gene:Hsc70Cb / 39557 FlyBaseID:FBgn0026418 Length:836 Species:Drosophila melanogaster
Sequence 2:NP_084477.1 Gene:Hspa13 / 110920 MGIID:1309463 Length:471 Species:Mus musculus


Alignment Length:423 Identity:114/423 - (26%)
Similarity:191/423 - (45%) Gaps:55/423 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VIGIDFGNESCYVAA--ARSGGIETLANDYSLRATPSFVAFDGKKRIIGVAAKNQQVTNMKNTVG 65
            |||||.|...|.|..  ..:|.::.:.::....:.||.|:|......:|..:.....:|.:||:.
Mouse    33 VIGIDLGTTYCSVGVFFPGTGKVKVIPDENGHISIPSMVSFTDGDVYVGYESLELADSNPQNTIY 97

  Fly    66 GFKRLLGRKFNDPHVQHELTSIPARVEAR-GDGSIGIKVNYLGEDQHFGPEQLTAMLFTKLKETS 129
            ..||.:|:.|....::.|:...|.:|..| |.....:..|   |.....||.:.:.|..||||.:
Mouse    98 DAKRFIGKIFTPEELEAEVGRYPFKVLHRNGMAEFSVTSN---ETIIVSPEFVGSRLLLKLKEMA 159

  Fly   130 AAAMQTQVNDCVIACPVFFTNAERKALLDAAQIAGLNVLRLMNETTATALAYGFYKNDLFEDKPR 194
            ...:...|.:.||:.|..|...:|.:.:.||.:|||.:||::||.||.|:|||.:|.|:|     
Mouse   160 EEYLGMPVANAVISVPAEFDLQQRNSTIQAANLAGLKILRVINEPTAAAMAYGLHKVDVF----- 219

  Fly   195 NVIFVDFGHSSLQASACAFTKGK-LKMLASTWDQIGGRDIDLALGDYFAKEFQERY--------- 249
            .|:.:|.|..:|..|......|. |....|..:::||:|.:..|..:..||..:.|         
Mouse   220 YVLVIDLGGGTLDVSLLNKQGGMFLTRAMSGNNKLGGQDFNQRLLQHLYKEIYQTYGFLPSRKEE 284

  Fly   250 -----------KINAKTNARANLRLLTEIE-KLKKQMSANSTKLP-----------LNIECFLDD 291
                       |:|...:..|.:.:|..:| |..|:.....::||           :| ..|...
Mouse   285 IHRLRQAVEMVKLNLTIHQSAQVSVLLTVEGKDSKEPQNGDSELPKDQLTPGDGHHVN-RVFRPG 348

  Fly   292 IDVSSS----------MQRSQMEELCAPVLQRVEQTFKRLLAESKLQLDDIHSVEIVGGSSRIPS 346
            :..|.|          :.|...:.|...:.|::....:::|.|..|...:|..|.:||||:|||.
Mouse   349 LSESKSGKSQVLFETEVSRKLFDALNEDLFQKILVPIQQVLKEGLLDKTEIDEVVLVGGSTRIPR 413

  Fly   347 VKQLIEQVFNKPASTTLNQDEAVSRGAALQCAI 379
            ::|:|::.|.|..:|:::.|.||..|.|:|..|
Mouse   414 IRQVIQEFFGKDPNTSVDPDLAVVTGVAIQAGI 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70CbNP_001189103.1 HSPA4_like_NDB 2..381 CDD:212670 114/423 (27%)
HSP70 3..682 CDD:278441 114/423 (27%)
Hspa13NP_084477.1 HSPA13-like_NBD 12..463 CDD:212679 114/423 (27%)
PRK13930 32..442 CDD:237564 111/417 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 317..350 5/33 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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