DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp110 and hspa1b

DIOPT Version :10

Sequence 1:NP_001189103.1 Gene:Hsp110 / 39557 FlyBaseID:FBgn0026418 Length:836 Species:Drosophila melanogaster
Sequence 2:XP_002937685.2 Gene:hspa1b / 100485441 XenbaseID:XB-GENE-5915622 Length:643 Species:Xenopus tropicalis


Alignment Length:690 Identity:194/690 - (28%)
Similarity:346/690 - (50%) Gaps:101/690 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IGIDFGNESCYVAAARSGGIETLANDYSLRATPSFVAFDGKKRIIGVAAKNQQVTNMKNTVGGFK 68
            ||||.|.....|...:.|.:|.:|||...|.|||:|||...:|:||.|||||...|..|||...|
 Frog     8 IGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPHNTVFDAK 72

  Fly    69 RLLGRKFNDPHVQHELTSIPARVEARGDGSIGIKVNYLGEDQHFGPEQLTAMLFTKLKETSAAAM 133
            ||:|||:::|.||.::...|.:|.:.| |...:.|.|.||.:.|.||::::|:.||:|||:.|.:
 Frog    73 RLIGRKYDEPVVQSDMKHWPFKVISDG-GKPKVTVEYKGEGKSFSPEEISSMVLTKMKETAEAYL 136

  Fly   134 QTQVNDCVIACPVFFTNAERKALLDAAQIAGLNVLRLMNETTATALAYGFYKNDLFEDKPRNVIF 198
            ..:|.:.||..|. |.:::|:|..||..||||||||::||.||.|:|||..|:...|   ||::.
 Frog   137 GYKVTNAVITVPAXFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDKSGRGE---RNILI 198

  Fly   199 VDFGHSSLQASACAFTKGKLKMLASTWD-QIGGRDIDLALGDYFAKEFQERYKINAKTNARANLR 262
            .|.|..:...|......|..::.|:..| .:||.|.|..:.::|.:||:.::|.:...|.||..|
 Frog   199 FDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRMVNHFVEEFKRKHKKDISPNKRALRR 263

  Fly   263 LLTEIEKLKKQMSANSTKLPLNIECFLDDIDVSSSMQRSQMEELCAPVLQRVEQTFKRLLAESKL 327
            |.|..|:.|:.:| :||:..:.|:...:.||..:|:.|::.|||||.:.:...:..::.:.::||
 Frog   264 LRTACERAKRTLS-SSTQASIEIDSLFEGIDFYTSITRARFEELCADLFRGTLEPVEKAMRDAKL 327

  Fly   328 QLDDIHSVEIVGGSSRIPSVKQLIEQVFN-KPASTTLNQDEAVSRGAALQCAIM--SPAVRVREF 389
            ....||.:.:||||:|||.|::|::..|| |..:.::|.||||:.|||:|.||:  ..:..|::.
 Frog   328 DKSQIHEIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILMGDKSENVQDL 392

  Fly   390 GVTDIQNYAVKVLWDSEGSAAPGEIEIFPQYHAS-PFSRLLTI-----NRKGPFNVSIVYGQQVP 448
            .:.|:...::.:      ..|.|.:.:..:.:.: |..:..|.     |:.|.. :.:..|::..
 Frog   393 LLLDVAPLSLGL------ETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVL-IQVYEGERAM 450

  Fly   449 YPDQT-IGVWKVKDVKPTERGEGQDVKLKVRINNNGIVLISSATLVEKKEAEEAAAAAEQAASEE 512
            ..|.. :|.:.:..:.|..||..| :::...|:.|||:.:|               |.::::.::
 Frog   451 TKDNNLLGKFDLTGIPPAPRGVPQ-IEVTFDIDANGILNVS---------------AVDKSSGKQ 499

  Fly   513 KPGDQTNNTGEPADGQQEAYCENEDDNNTSTASSPGGQGWAQRVKGWFGSGADKKKKASKATELP 577
            .....||:.|.                                                      
 Frog   500 NKITITNDKGR------------------------------------------------------ 510

  Fly   578 LECTTHGFSPVDLSNYTQQESKMIGNDQKETERIDAKNALEEFVYDMRNKLQGGPFERYVVEAER 642
                   .|..::....|:..|...:|:::.|:|.|||:||.:.::|::.::....:..:.:.::
 Frog   511 -------LSKEEIERMLQEADKYKADDEQQREKIAAKNSLESYAFNMKSTVEDNNIKDKISDNDK 568

  Fly   643 EKIVSQLNDLENWLYEDGEDCERDIYTSRLQALHQKTDPI 682
            :.|:.:..::.:|| |..:..|::.||.:.:.|.:..:||
 Frog   569 KSILDKCQEVISWL-EQNQLAEKEEYTHKQKELEKLCNPI 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp110NP_001189103.1 ASKHA_NBD_HSP70_HSPA4_like 4..378 CDD:466826 146/375 (39%)
hspa1bXP_002937685.2 PTZ00009 2..643 CDD:240227 194/690 (28%)

Return to query results.
Submit another query.