DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70Cb and hsp70.1

DIOPT Version :9

Sequence 1:NP_001189103.1 Gene:Hsc70Cb / 39557 FlyBaseID:FBgn0026418 Length:836 Species:Drosophila melanogaster
Sequence 2:NP_001349288.1 Gene:hsp70.1 / 100126123 ZFINID:ZDB-GENE-990415-91 Length:643 Species:Danio rerio


Alignment Length:702 Identity:194/702 - (27%)
Similarity:349/702 - (49%) Gaps:102/702 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IGIDFGNESCYVAAARSGGIETLANDYSLRATPSFVAFDGKKRIIGVAAKNQQVTNMKNTVGGFK 68
            ||||.|.....|...:.|.:|.:|||...|.|||:|||...:|:||.|||||...|..|||...|
Zfish     9 IGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTVFDAK 73

  Fly    69 RLLGRKFNDPHVQHELTSIPARVEARGDGSIGIKVNYLGEDQHFGPEQLTAMLFTKLKETSAAAM 133
            ||:||:|:||.||.::.....:|.:.| |...:.|.:.||::.|.||::::|:..|:||.:.|.:
Zfish    74 RLIGRRFDDPVVQSDMKHWSFKVVSDG-GKPKVAVEHKGENKTFNPEEISSMVLVKMKEIAEAYL 137

  Fly   134 QTQVNDCVIACPVFFTNAERKALLDAAQIAGLNVLRLMNETTATALAYGFYKNDLFEDKPRNVIF 198
            ..:|.:.||..|.:|.:::|:|..||..||||||||::||.||.|:|||..|.   :...|||:.
Zfish   138 GQKVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDKG---KSSERNVLI 199

  Fly   199 VDFGHSSLQASACAFTKGKLKMLASTWD-QIGGRDIDLALGDYFAKEFQERYKINAKTNARANLR 262
            .|.|..:...|......|..::.|:..| .:||.|.|..:.::|.:||:.::|.:...|.||..|
Zfish   200 FDLGGGTFDVSILTIEDGIFEVKATAGDTHLGGEDFDNRMVNHFVEEFKRKHKKDISQNKRALRR 264

  Fly   263 LLTEIEKLKKQMSANSTKLPLNIECFLDDIDVSSSMQRSQMEELCAPVLQRVEQTFKRLLAESKL 327
            |.|..|:.|:.:| :|::..:.|:...:.||..:|:.|::.||||:.:.:......::.|.::|:
Zfish   265 LRTACERAKRTLS-SSSQASIEIDSLYEGIDFYTSITRARFEELCSDLFRGTLDPVEKALKDAKM 328

  Fly   328 QLDDIHSVEIVGGSSRIPSVKQLIEQVFN-KPASTTLNQDEAVSRGAALQCAIM--SPAVRVREF 389
            ....||.:.:||||:|||.:::|::..|| :..:.::|.||||:.|||:|.||:  ..:..|::.
Zfish   329 DKAQIHDIVLVGGSTRIPKIQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAILMGDTSGNVQDL 393

  Fly   390 GVTDIQNYAVKVLWDSEGSAAPGEIE---IFPQYHASPFSRLLTINRKGPFNVSIVYGQQVPYPD 451
            .:.|:...::.:  ::.|......|:   ..|......|: ..:.|:.|.. :.:..|::....|
Zfish   394 LLLDVAPLSLGI--ETAGGVMTALIKRNTTIPTKQTQTFT-TYSDNQPGVL-IQVFEGERAMTKD 454

  Fly   452 QT-IGVWKVKDVKPTERGEGQDVKLKVRINNNGIVLISSATLVEKKEAEEAAAAAEQAASEEKPG 515
            .. :|.:::..:.|..||..| :::...|:.|||:.:|               ||:::..::...
Zfish   455 NNLLGKFELTGIPPAPRGVPQ-IEVTFDIDANGILNVS---------------AADKSTGKQNKI 503

  Fly   516 DQTNNTGEPADGQQEAYCENEDDNNTSTASSPGGQGWAQRVKGWFGSGADKKKKASKATELPLEC 580
            ..||:.|.                                                         
Zfish   504 TITNDKGR--------------------------------------------------------- 511

  Fly   581 TTHGFSPVDLSNYTQQESKMIGNDQKETERIDAKNALEEFVYDMRNKLQGGPFERYVVEAEREKI 645
                .|..::....|:..|....|..:.|:|.|||:||.:.::|:|.::....:..:.|.:::::
Zfish   512 ----LSKEEIERMVQEADKYKAEDDLQREKISAKNSLESYAFNMKNSVEDDNLKGKISEEDKKRV 572

  Fly   646 VSQLNDLENWLYEDGEDCERDIYTSRLQALHQKTDPI--KLRASDYEQG-PA 694
            :.:.|:..:|| |:.:..:::.|..:|:.|.:..:|:  ||    |:.| ||
Zfish   573 IEKCNEAVSWL-ENNQLADKEEYEHQLKELEKVCNPVISKL----YQGGMPA 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70CbNP_001189103.1 HSPA4_like_NDB 2..381 CDD:212670 141/380 (37%)
HSP70 3..682 CDD:278441 187/685 (27%)
hsp70.1NP_001349288.1 HSP70 5..643 CDD:331774 194/702 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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