DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6661 and gabD

DIOPT Version :10

Sequence 1:NP_648686.3 Gene:CG6661 / 39556 FlyBaseID:FBgn0036403 Length:581 Species:Drosophila melanogaster
Sequence 2:NP_417147.1 Gene:gabD / 948060 ECOCYCID:EG11329 Length:482 Species:Escherichia coli


Alignment Length:470 Identity:110/470 - (23%)
Similarity:183/470 - (38%) Gaps:89/470 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 QIEAAIKSALSAQGTWSLVPIAQRLAIWRRAATIIEEDELRLRVFLMMTLSKTADDATRDIRRLL 186
            :..|||.:|..|...|..:...:|..|.|....::.|.:..|...:.:...|...:|..:|... 
E. coli    49 ETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYA- 112

  Fly   187 TSLRANADYLEHLSELRFEIQGDMNVFPSFH-------LRPMDGFVAALAPFESVALSSSLALCP 244
                  |.::|..:|....|.||  ..|...       ::...|..||:.|:...|...:....|
E. coli   113 ------ASFIEWFAEEGKRIYGD--TIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGP 169

  Fly   245 AL-MGNTVLWNPSLEVAPVSYLIFRAFQ-EAGLPSGVINFVPANERLFLDTITDAVHFAGLNTQA 307
            || .|.|::..|:.: .|.|.|...... .||:|:||.|           .:|.:....|     
E. coli   170 ALAAGCTMVLKPASQ-TPFSALALAELAIRAGVPAGVFN-----------VVTGSAGAVG----- 217

  Fly   308 SAAFYRHVHKLVSDRMERYICFP-------RLVAECP----------GQNFHF-VHASAKVESVV 354
                    ::|.|:.:.|.:.|.       :|:.:|.          |.|..| |...|.::..|
E. coli   218 --------NELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAV 274

  Fly   355 SATVQAAFGFAGQYANSLSRMYVPSSMWPRLREELVEATEQLTIGDPIESETDIGAMVHINDFRR 419
            ...:.:.|..|||.....:|:||...::.|..|:|.:|..:|.|||.:::...||.::   |.:.
E. coli   275 EGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLDNGVTIGPLI---DEKA 336

  Fly   420 MQKLLQR-----TKNMEQLCGGSCDDSTGRFVDPTIVRVSDPLDPLLC-EPCCGPFLPVFVYSDD 478
            :.|:.:.     .|....:|||...:..|.|..|||: |..|.:..:. |...||..|:|.:.| 
E. coli   337 VAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTIL-VDVPANAKVSKEETFGPLAPLFRFKD- 399

  Fly   479 SFSEALKLA-ANQSRYALSGSIFASQDEVILHCLNQLRMSA----SNLYVNERCTGSTYGLTPFG 538
               ||..:| ||.:.:.|:...:|.....:......|....    :.:..||        :.|||
E. coli   400 ---EADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNE--------VAPFG 453

  Fly   539 GNRLSGTNDKSGSAY 553
            |.:.||.. :.||.|
E. coli   454 GIKASGLG-REGSKY 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6661NP_648686.3 ALDH-SF 68..567 CDD:448367 110/470 (23%)
gabDNP_417147.1 gabD 1..482 CDD:183050 110/470 (23%)

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