DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptip and AT4G03130

DIOPT Version :9

Sequence 1:NP_729947.2 Gene:Ptip / 39552 FlyBaseID:FBgn0052133 Length:2294 Species:Drosophila melanogaster
Sequence 2:NP_001329383.1 Gene:AT4G03130 / 828068 AraportID:AT4G03130 Length:770 Species:Arabidopsis thaliana


Alignment Length:584 Identity:104/584 - (17%)
Similarity:199/584 - (34%) Gaps:150/584 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1729 MRRVVALPQQ---QQAPQQHLVQQQIVVAPTQSPQQQQQMAVGVGVGVPVQRTPHGYIQTRPGQQ 1790
            :|:|.:.|.|   :.:..:||..:|               |.|:..|:.........::.:..::
plant   282 IRKVSSHPTQRVMKNSSAKHLKMEQ---------------ASGLSEGIMFISQKDAQLEDKAPKE 331

  Fly  1791 PIPMPQFYGHNPNLKLPADLFLVGCTFYIVEYDETDGDELPIWLDTIRQFGGDI--ERVYCPRVT 1853
            |:                               |.:.|.:.|.::|  |...:.  ..||.|..|
plant   332 PL-------------------------------EPEEDFIDIGINT--QIAAEAMSALVYAPCTT 363

  Fly  1854 HVICRTQRHGVVMQALRDAKRCVTAYWLSDICLKRQLMPPWQPLHLPFPSQFGYRKPLERYIITS 1918
            ...|.:......:..:||.        :|::..:.......:|........|......||.....
plant   364 EEACESDPIPGSVSEMRDQ--------VSNLSRRNNDTIEGEPERDKLNGLFSAAPHRERNSKKK 420

  Fly  1919 EGFEGEEVVRLQQMAEECGAIYTSYLSKVNTVVVC----------KQLEGNKFNAAKEWNIPMV- 1972
            ..|..||..|.....:.|            .:.:|          :.::.:.....:.|...:| 
plant   421 RKFTNEERTRANVSVKTC------------LLNLCEWRHPRAKRSRLMQRHHVPPRRSWGASLVK 473

  Fly  1973 ---NALWLSDVCIGNLSGLSQYENPKYQQYNLVAPFRIECNLVAHLLTAWKAPINLTQEAHER-- 2032
               ....||....|:|||..|..:.:...        |:.|:..|     .:|..:...:||.  
plant   474 DRSETNTLSSSLRGSLSGTRQASSCQSGV--------IDLNVAYH-----ASPRKIYDGSHESPC 525

  Fly  2033 --------VKRHLSDPYGNEQKL---------KRQKMNAFQQEQLPEQIVCVEYPTTTKPPKVIF 2080
                    :::.|:...|...|:         ||:.:                     ...:|:|
plant   526 NKDFPRLFLQKELTTSLGGPGKIGDFVWKDLRKRRNL---------------------AHVRVLF 569

  Fly  2081 SQVADAEAL---KKAVLILGGIVVDSPADATHLVMTRESRTCKLIQACCHVDYVLKSSWIADSAK 2142
            ||..|.|.:   ||.::.||.....|.||:||.:..|.:||..:::|.....:|:...|:...|:
plant   570 SQNLDDETVKQQKKIMVRLGISPASSSADSTHFIADRFARTRNMLEAIALGKFVVTPIWLESCAQ 634

  Fly  2143 AGKFVPTDPYRIQHIPVDENLQFNLNTVLCAPTRSTLFAGKYFHVTPDVFPAREEIIRMIESSGG 2207
            ....:....|.::.|..::: .|.|.|.|....:..|..|....:||.:.|:|..|..:::.:.|
plant   635 TRCLIDEKSYILRDIKKEKD-GFCLLTSLARAKQHPLLKGFKVCITPSIKPSRGMITDLVKMTQG 698

  Fly  2208 KVEPKRRSGASVAETHMQAPDSYIIVTCPTDMHLCADLTRHGNPKCHIVSTEFVMSSILRQQLE 2271
            :|.   .:...:|......|:..:|::|..|...|......|   ..|.::|.:::.|:.|:||
plant   699 QVV---EASEIIAAEDRNFPEDVLILSCKEDRDFCLPFVNQG---AVIFTSELLLNGIVIQKLE 756

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtipNP_729947.2 BRCT 9..77 CDD:214602
BRCT 96..174 CDD:278934
BRCT 1814..1887 CDD:237994 13/74 (18%)
PTCB-BRCT 1914..1976 CDD:289507 8/75 (11%)
BRCT <2087..2142 CDD:237994 16/57 (28%)
BRCT 2175..2265 CDD:278934 18/89 (20%)
AT4G03130NP_001329383.1 BRCT 566..639 CDD:381769 22/72 (31%)
BRCT_PAXIP1_rpt6_like 670..756 CDD:349385 20/91 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2043
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004880
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23196
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3992
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.000

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