DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptip and AT3G21480

DIOPT Version :10

Sequence 1:NP_729947.2 Gene:Ptip / 39552 FlyBaseID:FBgn0052133 Length:2294 Species:Drosophila melanogaster
Sequence 2:NP_188785.2 Gene:AT3G21480 / 821702 AraportID:AT3G21480 Length:1041 Species:Arabidopsis thaliana


Alignment Length:326 Identity:65/326 - (19%)
Similarity:128/326 - (39%) Gaps:79/326 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly  1961 FNAAKEWNIPMVNALWLSDVCIGNLSGLSQYENPKYQQYNLVAPFRIEC--NLVAHLLTAWKA-- 2021
            |:...:...|..|   :|.:|:|:             :|:     |:.|  :..:|....:::  
plant   752 FDTPAKSKTPSTN---VSPICMGD-------------EYH-----RLSCKDSFTSHTTREFRSLT 795

  Fly  2022 -----PINLTQEAHERVKRHLSDPYGNEQKLKRQKMNAFQQEQLPEQIVCVEYPTTTKPPKVIFS 2081
                 ||:.|:...:|  |.|..                         :|           |:||
plant   796 VPVAEPISETKSTRKR--RDLGS-------------------------IC-----------VLFS 822

  Fly  2082 QVADAEALKKAVLILGGIVV---DSPADATHLVMTRESRTCKLIQACCHVDYVLKSSWIADSAKA 2143
            |..|.:..|....||....:   .|..:|||.:....:||..:::|......|:.:.|:....:.
plant   823 QHLDEDVTKHQKKILARFDISEASSMKEATHFIADNFTRTRNMLEAIASGKPVVTTQWLESIDQV 887

  Fly  2144 GKFVPTDPYRIQHIPVDENLQFNLNTVLCAPTRSTLFAGKYFHVTPDVFPAREEIIRMIESSGGK 2208
            ..:|..|.|.::....::...||:...|....:..|..|:...:||:..||...|..::::..|.
plant   888 NIYVDEDMYILRDSKKEKEFCFNMGVSLARARQFPLLQGRRVFITPNTKPALNTITTLVKAVHGL 952

  Fly  2209 VEPKRRSG-ASVAETHMQAPDSYIIVTCPTDMHLCADLTRHGNPKCHIVSTEFVMSSILRQQLEI 2272
              |..|.| :|::|.  :.|::.::::|..|..:|......|   ..:.|:|.:::.|:.|:||.
plant   953 --PVERLGRSSLSED--KVPENLLVLSCEEDRAICIPFLERG---AEVYSSELLLNGIVTQRLEY 1010

  Fly  2273 E 2273
            |
plant  1011 E 1011

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtipNP_729947.2 BRCT_PAXIP1_rpt1 11..87 CDD:349346
BRCT_PAXIP1_rpt2 100..181 CDD:349342
BRCT_PAXIP1_rpt3 1814..1893 CDD:349343
BRCT_PAXIP1_rpt4 1914..1986 CDD:349362 6/24 (25%)
BRCT_PAXIP1_rpt5 2075..2147 CDD:349344 17/74 (23%)
BRCT_PAXIP1_rpt6 2179..2271 CDD:349393 22/92 (24%)
AT3G21480NP_188785.2 BRCT_MDC1_rpt1 819..882 CDD:349375 17/62 (27%)
BRCT_PAXIP1_rpt6_like 923..1009 CDD:349385 22/92 (24%)
Blue background indicates that the domain is not in the aligned region.

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