Sequence 1: | NP_729947.2 | Gene: | Ptip / 39552 | FlyBaseID: | FBgn0052133 | Length: | 2294 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001352489.1 | Gene: | mdc1 / 569805 | ZFINID: | ZDB-GENE-060810-185 | Length: | 1914 | Species: | Danio rerio |
Alignment Length: | 2050 | Identity: | 315/2050 - (15%) |
---|---|---|---|
Similarity: | 661/2050 - (32%) | Gaps: | 638/2050 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 538 RQQQILNQNQMQLQQIVQSG------QALTP----QQQQQQRQIQQQLQQVMQQQQQLQMQMQQQ 592
Fly 593 QQQQNLQQQQSPRMVQNRSPVMPPSTPSPSLQQQQHHATSNMLPPQSPRQLQSPAPQMTPPPPPS 657
Fly 658 PQNAQQQHLRQQQ---QMQQNRQQH-----------------MMGSPQQPQPQSMMSPQQQQQMQ 702
Fly 703 PFQ-QPVHQQQRMQLQQQQ----------QLAQ----------------QQQQQQQQSPQHISPQ 740
Fly 741 SPQISQTPPMQAKLHQHQVVPGQATQPQQSFSQQKPIDPTDPVQVAQVLSRSALSSNQDSLIMRQ 805
Fly 806 QQLKQQQQMQQQQQM-----APQP-----QQQQMAQQPQQQQQQQPQQQHTPSPRQSPLQQQPTT 860
Fly 861 PTLQQQPNQQNAQQIQQQQQQQQQQQQQQQQQQQQQQVLTQQQPQP------------------- 906
Fly 907 ---------GQQQQVITQRHVINTST-----------------------AQGQQIIQSHMSLALQ 939
Fly 940 KQQQLLHVQQQAQ-QQPQQ-------------------------------QQQITQVQQLPPAQQ 972
Fly 973 QQQLPQQHQVQQQQPQQVQFTQQQQIALGAGGQVRIIQQTIQRPPTNVQQQ-QQVPQQQQQQ--- 1033
Fly 1034 --IIGQFPQQQQLQQ-----QPQQQISGVQQPQQQQQQQKTFIISQQHFNQLSVQQQQQILAQNP 1091
Fly 1092 QSQNVYVVNQTQQQLVQQQQMLQQQQIIPQQQQQQRMQMQQQPQQIVVNQQILSDPQRLQYLQQQ 1156
Fly 1157 QLMQKQQQQQQQQQQQQQQQQQQQQQQLVGQQQQQILIQQQQTPQQQQILQQKLSNDNQQQQIMQ 1221
Fly 1222 LITQQQLPQRTPPPQQQQQQQLLLQQQQQSPQHHPQMQQ--QHWSPQSPAGGQMASSTPGTPTSV 1284
Fly 1285 --------------------GMQSPLP----GGPTTPQPQP---QQQFVPRGLRPQTSWPGQPQQ 1322
Fly 1323 Q----------QPQPTQQQQQIVLPPPQQQQPQQQQQHLGQQQQLVMQQPQQQKIVVDE------ 1371
Fly 1372 -----------KTHAHLMSLDAHKRAEYIT-------------------KLNQQNKPRVMLRQQV 1406
Fly 1407 AYQPRPGAPGSIVATRPAGPVPPGHIIVQHQMPPGLTQQQQVLWLQQQQGKRQVVVRA------- 1464
Fly 1465 ----GTP--------GLSPI----------QQQPGAGPQQQQQSPQQQPFNPNDPNQQMLMQRQQ 1507
Fly 1508 LRVQQIPIQQQGPQQLGKQTVQLITGPNGQLIEQQTIVQQPQQQSAPGTPTTPGAGGVLPGNANI 1572
Fly 1573 MTQTLVMTSTTPDGQPQQSPQQMNL---KTKTALANMLSNRL-------------GNNGAQTPQQ 1621
Fly 1622 QIIQLPDGQQPQQQQIVQQVVVTGAIQQQQQQLLLQQQQQQQQQQQMVVQQQLPPQQHVEPPSAA 1686
Fly 1687 GALRMMGQQHNATAGVPGPPRTQQELLMLQQQQQQQLLQQQQMRRVVALPQQQQAPQQHLVQQQI 1751
Fly 1752 ---VVAPT--------------------QSPQQQQQMAVGVGVGVPVQRTPHGYIQTRPGQQPIP 1793
Fly 1794 MPQFYGHNPNLKLPADLFLVGCTFYIVEYDETDGDELPIWLDTIRQFGGDIERVYCPRVTHVICR 1858
Fly 1859 TQRHGVVM--QALRDAKRCVTAYWLSDICLKRQLMPPWQPLHLPFPSQFGYRKPLER---YIITS 1918
Fly 1919 EGFEGEEVVRLQQMAEECGAIYTSYLSKVNTVVVCKQLEGNKFNA-----AKEWNIPMVNALWLS 1978
Fly 1979 DVCIGNLSGLSQYENPKYQQYNLVAPFRIECNLVAHLLTAWKAPINLTQEAHERVKRHLSDPYGN 2043
Fly 2044 EQKLKRQKMNAFQQEQLPEQIVCVEYPTTTKPPKVIFSQVADAEALKKAVLILGGIVVDSPADAT 2108
Fly 2109 HLVMTRESRTCKLIQACCHVDYVLKSSWIADSAKAGKFVPTDPYRIQHIPVDENLQFNLNTVLCA 2173
Fly 2174 PTRSTLFAGKYFHVTPDVFPAREEIIRMIESSGGKVEPKRRSGASVAETHMQAPDSYIIVTCPTD 2238
Fly 2239 MHLCADLTRHGNPKCHIVSTEFVMSSILRQQLEIE 2273 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ptip | NP_729947.2 | BRCT | 9..77 | CDD:214602 | |
BRCT | 96..174 | CDD:278934 | |||
BRCT | 1814..1887 | CDD:237994 | 10/74 (14%) | ||
PTCB-BRCT | 1914..1976 | CDD:289507 | 12/66 (18%) | ||
BRCT | <2087..2142 | CDD:237994 | 15/54 (28%) | ||
BRCT | 2175..2265 | CDD:278934 | 26/89 (29%) | ||
mdc1 | NP_001352489.1 | FHA | 30..139 | CDD:238017 | |
MDN1 | <343..677 | CDD:331582 | 47/341 (14%) | ||
Neuromodulin_N | <936..1498 | CDD:331332 | 89/647 (14%) | ||
BRCT | 1681..1780 | CDD:320726 | 35/191 (18%) | ||
BRCT | 1805..1876 | CDD:214602 | 26/82 (32%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2043 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |