DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptip and Ect2

DIOPT Version :9

Sequence 1:NP_729947.2 Gene:Ptip / 39552 FlyBaseID:FBgn0052133 Length:2294 Species:Drosophila melanogaster
Sequence 2:NP_001102017.2 Gene:Ect2 / 361921 RGDID:1308524 Length:913 Species:Rattus norvegicus


Alignment Length:553 Identity:84/553 - (15%)
Similarity:179/553 - (32%) Gaps:205/553 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KISDKLFEDVIYFVLGNLD--------EEIERFLKSGGAQSKLFLSDQITHMICATNYNEEELSM 61
            |..:||.:.:|     |::        :.:|.|   |...|..|     .::...|::   :.|:
  Rat    89 KSDEKLIKSII-----NMEIKVPCVKMDSMEEF---GSLDSPEF-----ENIFVVTDF---QTSV 137

  Fly    62 NLDLYSA------IPVTEQWIVHSAKLGRMASTRAFDPSPNQMRLMRGIRVAITNVV---AGDRR 117
            ..|||.|      .||    |::.|::|        :|.|...|.:  ...::.|:|   .|.|:
  Rat   138 FNDLYKADCRIVGPPV----ILNCAQMG--------EPLPFSCRPL--YCTSMLNLVLCFTGFRK 188

  Fly   118 -----RLYAMLTYHGAVVTHSFGATNTHLVCGAANGGIYNKALALPKNAIIIVTPDWVTDSLKYK 177
                 :|..::.:.|.|:.....:..||||.....|..:..|::|   ...|:.|.|:.::.:.:
  Rat   189 KEELVKLVTLVHHMGGVIRKECNSKVTHLVANCTQGEKFRVAVSL---GTPIMRPGWIYEAWERR 250

  Fly   178 NCMPVETYHPRLLKPIEKQRTQKQQATQQQQIQQQQQLQHQHQMQQQQQQQQQQQQQQQQQQQQQ 242
            |                          :|.........:::.::...|                 
  Rat   251 N--------------------------EQCFCAADDDFRNEFKVPPFQ----------------- 272

  Fly   243 QQQQQQQQQQQQQQHQQQIIQQQATATSALSDILGFGEDSVAAKSIASIKSQLQASAEQIQQQQ- 306
                                       ..:...|||.::.             :.|.|::.:.| 
  Rat   273 ---------------------------DCILSFLGFSDEE-------------KHSMEEMTEMQG 297

  Fly   307 ---LPVPAQQQV-VFVRPQPQPQQPAQQSPHQLQQGGPQAPTPAPHPQHQQQLIIQQQKIIPANL 367
               |||..::.. :.|......:.|.:.|                     ::|.:.:|:....::
  Rat   298 GTYLPVGDERCTHLIVDENTVKELPFEPS---------------------KKLFVVKQEWFWGSI 341

  Fly   368 QQ-----------QPQNQQQIKNILQQRQMKTTQQSQQQQQIQMQLMQ--QEQQPHPQPLQQQLA 419
            |.           :..|..::|..:....:.|...::::::::..|.|  :|....|.|.:::.:
  Rat   342 QMDARAGETMYLYEKANTPELKKSVSLLSLSTPNSNRKRRRLKESLAQLSRETDLSPFPPRKRPS 406

  Fly   420 QQHPQQIAQQLPQQLSQQHPQQIPQQQQSPRLPTTPTGR----QTPR-----TPSTTPQPVQSPQ 475
            .:|...|...|.                   :..||...    :||:     :.|:||.|.:...
  Rat   407 AEHSLSIGSLLD-------------------ISNTPDSSIHYGETPKSCAKSSRSSTPVPPKQSA 452

  Fly   476 HHQQIVQQQQVVQQQVGQQQTMVQQQQIVQQQQ 508
            ..|...:..|.....|....|::|..|:..:::
  Rat   453 RWQVAKELYQTESNYVNILATIIQLFQVPLEEE 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtipNP_729947.2 BRCT 9..77 CDD:214602 17/81 (21%)
BRCT 96..174 CDD:278934 18/85 (21%)
BRCT 1814..1887 CDD:237994
PTCB-BRCT 1914..1976 CDD:289507
BRCT <2087..2142 CDD:237994
BRCT 2175..2265 CDD:278934
Ect2NP_001102017.2 PTCB-BRCT 179..242 CDD:289507 15/65 (23%)
BRCT 266..341 CDD:278934 15/152 (10%)
RhoGEF 456..640 CDD:279015 5/30 (17%)
PH_Ect2 631..804 CDD:269936
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D305707at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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