| Sequence 1: | NP_729947.2 | Gene: | Ptip / 39552 | FlyBaseID: | FBgn0052133 | Length: | 2294 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_006511769.3 | Gene: | Topbp1 / 235559 | MGIID: | 1920018 | Length: | 1541 | Species: | Mus musculus |
| Alignment Length: | 323 | Identity: | 74/323 - (22%) |
|---|---|---|---|
| Similarity: | 120/323 - (37%) | Gaps: | 72/323 - (22%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1876 VTAYWLSDICLKRQLM--PPWQPLHLPFPSQFGYRKPLERYIITSEGFEGEEVVRLQQMAEECGA 1938
Fly 1939 -IYTSYLSKVN--------TVVVCKQLEGNKFNAAKEWNIPMVNALWLSDVC-IGNLSGLSQY-- 1991
Fly 1992 EN-PKYQQ-YNLVAPFRIECN--LVAHLLTAWKAPINLTQEAHERVKRHLSDPYGNEQKLKRQKM 2052
Fly 2053 NAFQQEQLPEQIVCVEYPTTTKPPKVIFSQVADAEALKKAVLILGGIVVDSPADATHLVMTRESR 2117
Fly 2118 TCKLIQACCHVDYVLKSSWIADSAKAGKFVPTDPYRIQHI--PVDENLQFNLNTVLCAPTRST 2178 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Ptip | NP_729947.2 | BRCT_PAXIP1_rpt1 | 11..87 | CDD:349346 | |
| BRCT_PAXIP1_rpt2 | 100..181 | CDD:349342 | |||
| BRCT_PAXIP1_rpt3 | 1814..1893 | CDD:349343 | 6/18 (33%) | ||
| BRCT_PAXIP1_rpt4 | 1914..1986 | CDD:349362 | 24/81 (30%) | ||
| BRCT_PAXIP1_rpt5 | 2075..2147 | CDD:349344 | 10/71 (14%) | ||
| BRCT_PAXIP1_rpt6 | 2179..2271 | CDD:349393 | 74/323 (23%) | ||
| Topbp1 | XP_006511769.3 | BRCT_TopBP1_rpt1 | 183..254 | CDD:349369 | |
| BRCT_TopBP1_rpt2_like | 273..349 | CDD:349363 | |||
| BRCT_TopBP1_rpt3 | 427..508 | CDD:349350 | |||
| BRCT_TopBP1_rpt4 | 631..714 | CDD:349380 | 9/25 (36%) | ||
| BRCT_TopBP1_rpt5 | 723..811 | CDD:349387 | 27/87 (31%) | ||
| BRCT_TopBP1_rpt6 | 982..1052 | CDD:349359 | |||
| LGT | <1153..1274 | CDD:469786 | |||
| PHA01732 | 1228..>1297 | CDD:222828 | |||
| BRCT_TopBP1_rpt7 | 1289..1363 | CDD:349370 | |||
| BRCT_TopBP1_rpt8 | 1418..1496 | CDD:349360 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||