DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptip and paxip1

DIOPT Version :9

Sequence 1:NP_729947.2 Gene:Ptip / 39552 FlyBaseID:FBgn0052133 Length:2294 Species:Drosophila melanogaster
Sequence 2:XP_012821142.3 Gene:paxip1 / 100487292 XenbaseID:XB-GENE-480192 Length:1328 Species:Xenopus tropicalis


Alignment Length:2298 Identity:544/2298 - (23%)
Similarity:786/2298 - (34%) Gaps:1004/2298 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ENLKISDKLFEDVIYFVLGNLDEEIERFLKSGGAQSKLFLSDQITHMICATNYNEEELSMNLDLY 66
            |.:|:.:.:|:||.::.:|:||.::.:.||:|.|: ::..:...||:| |.:.:..|:....:::
 Frog     4 EEMKVPEDMFKDVKFYPVGDLDPKVIQMLKAGKAK-EVSYNALATHII-AEDGDNPEVGEAREVF 66

  Fly    67 SAIPVTEQWIVHSAKLGRMASTRAFDPSPNQMRLMRGIRVAITNVVAGDRRRLYAMLTYHGAVVT 131
            ....|...|::.|.:.|.......|.|...|  :..|:...::.|...||..|:|:.|::|....
 Frog    67 DLPVVKPSWVILSVRCGARLPENGFSPESGQ--IFFGVTACLSQVSPEDRNSLWALTTFYGGDCQ 129

  Fly   132 HSFGATNTHLVCGAANGGIYNKALALPKNAIIIVTPDWVTDSLKYKNCMPVETYHPRLLKPIEKQ 196
            .:.....|||:.....|..|.  .|..:..|.|||||||.||:..|.....|.|||||:      
 Frog   130 LNLNKKCTHLIVPEPKGNKYE--YAFQRENIKIVTPDWVMDSVSEKTKKDEELYHPRLI------ 186

  Fly   197 RTQKQQATQQQQIQQQQQLQHQHQMQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQI 261
                                    :.:::::::::.:..:.|.                      
 Frog   187 ------------------------VYEEEEEEEEEVENDESQN---------------------- 205

  Fly   262 IQQQATATSALSDILGFGEDSVAAKSIASIKSQLQASAEQIQQQQLPVPAQQQVVFVRPQPQPQQ 326
                           |..||..::||                                       
 Frog   206 ---------------GSDEDKYSSKS--------------------------------------- 216

  Fly   327 PAQQSPHQLQQGGPQAPTPAPHPQHQQQLIIQQQKIIPANLQQQPQNQQQIKNILQQRQMKTTQQ 391
                ||...::|.|                                            ..||:.:
 Frog   217 ----SPVTSREGSP--------------------------------------------VRKTSPK 233

  Fly   392 SQQQQQIQMQLMQQEQQPHPQPLQQQLAQQHPQQIAQQLPQQLSQQHPQQIPQQQQS------PR 450
            ....::|:.:||..:........|::.....|.::    ||..:.:  :|:.|.:.|      ..
 Frog   234 RISSEKIKSELMFDDSSDSSPEKQERNLNWTPAEV----PQMSTAK--RQLHQGKDSGLINLCAN 292

  Fly   451 LPTTPTGRQTPRTPSTTPQPVQSPQHHQQIVQQQQVVQQQVGQQQTMVQQQQIVQQQQIVQQQVV 515
            :|..| |...|            |:....::                                  
 Frog   293 VPPVP-GNILP------------PEARNNLL---------------------------------- 310

  Fly   516 QQQQPQQQSVPVSPQIIHQHLMRQQQILNQNQMQLQQIVQSGQALTPQQQQQQRQIQQQLQQVMQ 580
                   .|:|.:|.:..|.:|                ...|.|:            :.|:.:  
 Frog   311 -------TSLPGAPGLERQDMM----------------AFHGPAV------------RTLRNI-- 338

  Fly   581 QQQQLQMQMQQQQQQQNLQQQQSPRMVQNRSPVMPPSTPSPSLQQQQHHATSNMLPPQSPRQLQS 645
                        ....::||...|..|.:....:..||  .||:||.:|                
 Frog   339 ------------TNSADIQQVNRPSNVAHILQTLSAST--KSLEQQVNH---------------- 373

  Fly   646 PAPQMTPP-----PPPSPQNAQQQHLRQQQQMQQNRQQHMMGSPQQPQPQSMMSPQQQQQMQPFQ 705
              ||...|     ....|..::.|||     :||:.|      |||         |||||..|..
 Frog   374 --PQQGHPNAMLFGQVKPLTSEAQHL-----IQQSHQ------PQQ---------QQQQQHHPLV 416

  Fly   706 QPVHQQQRMQLQQQQQLAQQQQQQQQQSPQHISPQSPQISQTPPMQAKLHQHQVVPGQATQPQQS 770
            | :..||.:||||||   ||||..||..|||   |.||::|..|.              ||.|.|
 Frog   417 Q-LQPQQLLQLQQQQ---QQQQITQQVFPQH---QFPQVNQQHPF--------------TQLQFS 460

  Fly   771 FSQQKPIDPTDPVQVAQVLSRSALSSNQDSLIMRQQQLKQQQQMQQQQQMAPQPQQQQMAQQPQQ 835
                                              ||||..|||:                .:|||
 Frog   461 ----------------------------------QQQLHPQQQL----------------HRPQQ 475

  Fly   836 QQQQQPQQQHTPSPRQSPLQQQPTTPTLQQQPNQQNAQQIQQQQQQQQQQQQQQQQQQQQQQVLT 900
            |..|..||||                .||||     ..|:|||..||:||..|||..||      
 Frog   476 QTLQHFQQQH----------------VLQQQ-----LHQLQQQHLQQKQQNMQQQNLQQ------ 513

  Fly   901 QQQPQPGQQQQVITQRHVINTSTAQGQQIIQSHMSLALQKQQQLLHVQQQAQQQPQQQQQITQVQ 965
                                                  |..||:|..||..||.|.|||.:.   
 Frog   514 --------------------------------------QNLQQILQHQQSIQQTPSQQQALQ--- 537

  Fly   966 QLPPAQQQQQLPQQHQVQQQQPQQVQFTQQQQIALGAGGQVRIIQQTIQRPPTNVQQQQQVPQQQ 1030
              |..||||.|  |..:||                         |||:|   :|:|||...|..|
 Frog   538 --PTIQQQQAL--QPNLQQ-------------------------QQTLQ---SNLQQQTLQPIIQ 570

  Fly  1031 QQQIIGQFPQQQQLQQQPQQQISGVQQPQQQQQQQKTFIISQQHFNQLSVQQQQQILAQNPQSQN 1095
            |||.:    |||.:||       .:||.|||||.|           .|::||:|||         
 Frog   571 QQQAL----QQQNIQQ-------SIQQIQQQQQIQ-----------HLTLQQKQQI--------- 604

  Fly  1096 VYVVNQTQQQLVQQQQMLQQQQIIPQQQQQQRMQMQQQPQQIVVNQQILSDPQRLQYLQQQQLMQ 1160
                   ||..:|||||||:||                                         :|
 Frog   605 -------QQHSLQQQQMLQKQQ-----------------------------------------LQ 621

  Fly  1161 KQQQQQQQQQQQQQQQQQQQQQQLVGQQQQQILIQQQQTPQQQQILQQKLSNDNQQQQIMQLITQ 1225
            .|..||||.|....||||.|.|.|   |||||         |.|.|||                 
 Frog   622 SQSLQQQQMQTHVLQQQQIQTQAL---QQQQI---------QNQALQQ----------------- 657

  Fly  1226 QQLPQRTPPPQQQQQQQLLLQQQQQSPQHHPQMQQQHWSPQSPAGGQMASSTPGTPTSVGMQSPL 1290
                     |||.|.|...||      |||                                   
 Frog   658 ---------PQQNQVQTHTLQ------QHH----------------------------------- 672

  Fly  1291 PGGPTTPQPQPQQQFVPRGLRPQTSWPGQPQQQQPQPTQQQQQIVLPPPQQQQPQQQQQHLGQQQ 1355
                                            .|||..||||..|     |.|..|||.|  |.|
 Frog   673 --------------------------------LQPQTLQQQQHHV-----QGQTVQQQTH--QLQ 698

  Fly  1356 QLVMQQPQQQKIVVDEKTHAHLMSLDAHKRAEYITKLNQQNKPRVMLRQQVAYQPRPGAPGSIVA 1420
            ...:||.||.:|                         ..||   :.::.|:              
 Frog   699 VQTLQQQQQHQI-------------------------QTQN---IQIQHQI-------------- 721

  Fly  1421 TRPAGPVPPGHIIVQHQMPPGLTQQQQVLWLQQQQGKRQVVVRAGTPGLSPIQQQPGAGPQQQQQ 1485
              ||..        |||:||.:. |||.|.||||                          .:|||
 Frog   722 --PAAN--------QHQIPPQML-QQQTLQLQQQ--------------------------MKQQQ 749

  Fly  1486 SPQQQPFNPNDPNQQMLMQRQQLRVQQIPIQQQGPQQLGKQTVQLITGPNGQLIEQQTIVQQPQQ 1550
            :.||             :|:||       ||||                     :|||:.||..|
 Frog   750 TLQQ-------------LQQQQ-------IQQQ---------------------QQQTLQQQQIQ 773

  Fly  1551 QSAPGTPTTPGAGGVLPGNANIMTQTLVMTSTTPDGQPQQSPQQMNLKTKTALANMLSNRLGNNG 1615
            |:                                                               
 Frog   774 QT--------------------------------------------------------------- 775

  Fly  1616 AQTPQQQIIQLPDGQQPQQQQIVQQVVVTGAIQQQQQQLLLQQQQQQQQQQQMVVQQQLPPQQHV 1680
              |.|||:       |||.:|:        |:||||                  :|...|||..:
 Frog   776 --THQQQM-------QPQIEQV--------ALQQQQ------------------IQSGAPPQSSL 805

  Fly  1681 EPPSAAGALRMMGQQHNATAGVPGPPRTQQELLMLQQQQQQQLLQQQQMRRVVALPQQQQAPQQH 1745
            :|...        |||            :..|..:|||.||  ||||:|:|.::|          
 Frog   806 QPQQV--------QQH------------KHNLHQVQQQLQQ--LQQQRMQRQMSL---------- 838

  Fly  1746 LVQQQIVVAPTQSPQQQQQMAVGVGVGVPVQRTPHGYIQTRPGQQPIPMPQFYGHNPNLKLPADL 1810
                            .||||                     .|||:...|.:||:|::.:|.|.
 Frog   839 ----------------TQQMA---------------------NQQPLQPHQLHGHDPSVDIPEDF 866

  Fly  1811 FLVGCTFYIVEYDETDGDE--LPIWLDTIRQFGGDIERVYCPRVTHVICRTQRHGVVMQALRDAK 1873
            ||:||.|.|.:|.|...|:  |..|...|:..||.::.....|.||::|.:|...:..|||::.|
 Frog   867 FLLGCVFAIADYPEQMPDKQLLATWKRIIQTHGGTVDATLSSRCTHLLCESQVSSMYAQALKERK 931

  Fly  1874 RCVTAYWLSDICLKRQLMPPWQPLHLP--FPSQFGYRKPLERYIITSEGFEGEEVVRLQQMAEEC 1936
            ||:||:||:.:..|::::||::.||.|  ||..   .||..::||:..||...:...|:.||...
 Frog   932 RCITAHWLNAVLKKKKMVPPYRALHFPVAFPPG---GKPCSQHIISVTGFVDSDRDDLKLMAYLA 993

  Fly  1937 GAIYTSYLSKVNTVVVCKQLEGNKFNAAKEWNIPMVNALWLSDVCIGNLSGLSQYENPKYQQYNL 2001
            ||.||.||.:.|||:|||:..|.|:..||||.||.||||||.|:.:|||..|.|.::.:|..:||
 Frog   994 GAKYTGYLCRSNTVLVCKEPSGLKYEKAKEWRIPCVNALWLCDILLGNLEALRQIQHSRYTVFNL 1058

  Fly  2002 VAPFRIECNLVAHLLTAWKAPINLTQEAHERVKRHLSDPYGNEQKL--KRQKMNAFQQEQLPEQI 2064
            ..|.....:||.:||.||:.|:.::.|....::..|. |..||..:  ||.::     |.:|   
 Frog  1059 QDPLAPSPHLVTNLLDAWRMPLKVSSELLMSIRVPLK-PKQNEPAVQPKRPRI-----EDIP--- 1114

  Fly  2065 VCVEYPTTTK-----PPKVIFS--QVADAEALKKAVLILGGIVVDSPADATHLVMTRESRTCKLI 2122
                 |.|.|     .|.|:|:  .....:...|.:.||||.|.||....|||:..:.:||.|.:
 Frog  1115 -----PPTKKLSPDLTPHVMFTGFDPLQVQQYIKKLYILGGEVADSAQKCTHLLANKVTRTVKFL 1174

  Fly  2123 QACCHVDYVLKSSWIADSAKAGKFVPTDPYRIQHIPVDENLQFNLNTVLCAPTRSTLFAGKYFHV 2187
            .|.....:::...|:.:|.|:.||:....|.::....:....|:|...|.....:.||.||||::
 Frog  1175 TAISVAKHIVTPEWLDESFKSQKFIEEQNYILRDAEAEVLFCFSLEESLKRAHSTPLFKGKYFYI 1239

  Fly  2188 TPDVFPAREEIIRMIESSGGKVEPKRRSGASVAETHMQAP--DSYIIVTCPTDMHLCADLTRHGN 2250
            ||.:.|:...:..::|.:|||:..|:.|...:.| |.|..  ...|:::|..|:|||.:... |:
 Frog  1240 TPGICPSLSTMKAIVECAGGKILMKQPSFRKIME-HKQNKRLAEIILISCENDLHLCREYFA-GS 1302

  Fly  2251 PKCHIVSTEFVMSSILRQQLEIE 2273
            ...|  :.|||::.:|.|.|:.|
 Frog  1303 IDVH--NAEFVLTGVLTQTLDYE 1323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtipNP_729947.2 BRCT 9..77 CDD:214602 17/67 (25%)
BRCT 96..174 CDD:278934 24/77 (31%)
BRCT 1814..1887 CDD:237994 27/74 (36%)
PTCB-BRCT 1914..1976 CDD:289507 30/61 (49%)
BRCT <2087..2142 CDD:237994 17/54 (31%)
BRCT 2175..2265 CDD:278934 29/91 (32%)
paxip1XP_012821142.3 BRCT_PAXIP1_rpt1 13..87 CDD:349346 19/75 (25%)
BRCT_PAXIP1_rpt2 98..178 CDD:349342 25/81 (31%)
BRCT_PAXIP1_rpt3 870..951 CDD:349343 28/80 (35%)
BRCT_PAXIP1_rpt4 971..1043 CDD:349362 36/71 (51%)
BRCT_PAXIP1_rpt5 1125..1199 CDD:349344 22/73 (30%)
BRCT_PAXIP1_rpt6 1231..1321 CDD:349393 31/93 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 64 1.000 Domainoid score I10043
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004880
OrthoInspector 1 1.000 - - oto104087
Panther 1 1.100 - - LDO PTHR23196
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R145
SonicParanoid 1 1.000 - - X3992
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.130

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