DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptip and ect2

DIOPT Version :9

Sequence 1:NP_729947.2 Gene:Ptip / 39552 FlyBaseID:FBgn0052133 Length:2294 Species:Drosophila melanogaster
Sequence 2:XP_012818117.1 Gene:ect2 / 100127840 XenbaseID:XB-GENE-998093 Length:985 Species:Xenopus tropicalis


Alignment Length:389 Identity:81/389 - (20%)
Similarity:127/389 - (32%) Gaps:129/389 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  1888 RQLMPP--------WQPLHLPFPSQFGYRKPLERYIITSEGF-EGEEVVRLQQMAEEC-GAIYTS 1942
            |.|.||        .:|  |||.|:..|...:...::...|| :.||:|:|..:.... |.|...
 Frog   146 RVLGPPIIIYCAQKGEP--LPFTSRPLYCASMLNLVLCFTGFRKKEELVKLVTLVHHMGGTIRKD 208

  Fly  1943 YLSKVNTVVVCKQLEGNKFNAAKEWNIPMVNALWLSDVCIGNLSGLSQYENPKYQQYNLVAPFRI 2007
            :.||| |.::.....|:||..|.....|::.|.|                               
 Frog   209 FSSKV-THLIANSTHGDKFRVAVSLGTPIMKADW------------------------------- 241

  Fly  2008 ECNLVAHLLTAWKAPINLTQEAHERVKRHLSDPYGNEQKLKRQKMNAFQQEQLPEQIVCVEYPTT 2072
                   ::.||:.            :..|.....||:...:.|:..||.        |:     
 Frog   242 -------IIQAWEK------------RNELEFSATNEEFKSKFKVPPFQD--------CI----- 274

  Fly  2073 TKPPKVIFSQVADAE--ALKKAVLILGGIVVDSPAD--ATHLVMTRES-------RTCKLIQACC 2126
                 :.|...:|.:  ::::...:.||..: |..|  .||||:...|       ...||     
 Frog   275 -----LSFLGFSDEDRVSMEEMTEMQGGTFL-SVGDEKCTHLVVEENSVKELPFEPPKKL----- 328

  Fly  2127 HVDYVLKSSW----IADSAKAGK----FVPTDPYRIQ--------HIPVDENLQFNLNTVLCAPT 2175
               ||:|..|    |...|:||:    |...|...::        :.|.....:..|...|...|
 Frog   329 ---YVVKQEWFWGSIQMDARAGETMYLFEKNDSPALKKSVSLLSLNTPSSNRKKRRLKDTLAQLT 390

  Fly  2176 RSTLFAGKYFHVTPDVFPAREEIIRMIESSGGK---VEPKRRSGASVAETHMQAPDSYIIVTCP 2236
            |.|       .:||  ||.|:........|.|.   :.....||.|.::|...:..|.|....|
 Frog   391 RET-------DLTP--FPPRKRPSAEHSLSIGSLLDISNTPESGKSFSDTPKISKPSKISTPVP 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtipNP_729947.2 BRCT 9..77 CDD:214602
BRCT 96..174 CDD:278934
BRCT 1814..1887 CDD:237994
PTCB-BRCT 1914..1976 CDD:289507 18/63 (29%)
BRCT <2087..2142 CDD:237994 16/69 (23%)
BRCT 2175..2265 CDD:278934 17/65 (26%)
ect2XP_012818117.1 BRCT_Ect2_rpt1 175..250 CDD:349365 21/125 (17%)
BRCT_Ect2_rpt2 269..348 CDD:349364 23/105 (22%)
RhoGEF 453..637 CDD:214619
PH_Ect2 628..800 CDD:269936
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D305707at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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