DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment upSET and SET2

DIOPT Version :9

Sequence 1:NP_001261819.1 Gene:upSET / 39551 FlyBaseID:FBgn0036398 Length:3146 Species:Drosophila melanogaster
Sequence 2:NP_012367.2 Gene:SET2 / 853271 SGDID:S000003704 Length:733 Species:Saccharomyces cerevisiae


Alignment Length:873 Identity:167/873 - (19%)
Similarity:290/873 - (33%) Gaps:289/873 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  1883 KKRKVSRS------LNNNTNGLGSGGGSNNKRRKSIVVESDGESHALTNSESEDQGQHPQS---- 1937
            |.:.||.|      ||||..|        :|.::....|.|....|||..|:.|...:...    
Yeast     3 KNQSVSASEDEKEILNNNAEG--------HKPQRLFDQEPDLTEEALTKFENLDDCIYANKRIGT 59

  Fly  1938 -------------------HHSGSEDQAAGLLLALAH---------NNSSPNEPFKSPLSQSHSL 1974
                               :|:..||......|.|..         .|...|:.|:         
Yeast    60 FKNNDFMECDCYEEFSDGVNHACDEDSDCINRLTLIECVNDLCSSCGNDCQNQRFQ--------- 115

  Fly  1975 PATPASVSSACLLIEAAMGPLQQQPAPASASPSLAEFKYPPGGAKTKKSLMSSWFQQAEQQHASG 2039
                                 ::|.||.    ::.:.|:...|.:.::.:.::.|          
Yeast   116 ---------------------KKQYAPI----AIFKTKHKGYGVRAEQDIEANQF---------- 145

  Fly  2040 LDSLVQAAMSEINGE-------REQL----QRQ---------PQGESLPAPALLKVEQFIHQAES 2084
                    :.|..||       |::|    ||.         ..||.:.|.....:.:|.:.:.|
Yeast   146 --------IYEYKGEVIEEMEFRDRLIDYDQRHFKHFYFMMLQNGEFIDATIKGSLARFCNHSCS 202

  Fly  2085 TTAVPAREQLHLPLQNNSSVKKRWLRQAI--------SEETT---PVDEL-QQSQ---------- 2127
            ..|..           |..|.|..||..|        .||.|   .||.. .|:|          
Yeast   203 PNAYV-----------NKWVVKDKLRMGIFAQRKILKGEEITFDYNVDRYGAQAQKCYCEEPNCI 256

  Fly  2128 ------NQSVTATPSPQPVPTVSPLANGFSTPLKKRRLVVVSNGTNVESDETHIDVIGEP--KDE 2184
                  .|:..|:..||.:..    |.|.:..::|:.|.:..             :.|||  |:|
Yeast   257 GFLGGKTQTDAASLLPQNIAD----ALGVTVSMEKKWLKLKK-------------LSGEPIIKNE 304

  Fly  2185 AEENVAMTELK-VEIENHHQEQDDDVDILRSPS---PGTHQIVAEDNLVKI-EPEDTSAAADDVK 2244
             .||:.:..|: :|:    |..|..||:.:..|   ...::|:|...|.:: ..:|.|.....:|
Yeast   305 -NENINIEFLQSLEV----QPIDSPVDVTKIMSVLLQQDNKIIASKLLKRLFTIDDDSLRHQAIK 364

  Fly  2245 IDVEREESQACDKFEEMVKVKREEE--------EQREKEIKQLQERQEH--EQPKVEPAPVEPKL 2299
            :     ....|  |.:|:|:...|:        |..|.:||.::...:.  |.||.....:|...
Yeast   365 L-----HGYTC--FSKMLKLFITEQPQVDGKGNETEEDDIKFIKGILDFLLELPKTTRNGIESSQ 422

  Fly  2300 ENTVAKAEPKVEPSQEIVSKKEPTKVEPKPGESLLRSTATVT---ATPTAATIAATTLLDVSKVA 2361
            .:.|.|..|...|.           ::|...|.|.:.:...|   .|.....:||:.::|:.:|.
Yeast   423 IDNVVKTLPAKFPF-----------LKPNCDELLEKWSKFETYKRITKKDINVAASKMIDLRRVR 476

  Fly  2362 FKTRPP----LKLEDEPQKKKPKLESILPAPVATVPPVSVPPIPAASNATTSAVTNTAAASLTTT 2422
            .   ||    :.....|.....:.::.|..|            |:.|:...|:.:||...|.:::
Yeast   477 L---PPGWEIIHENGRPLYYNAEQKTKLHYP------------PSGSSKVFSSRSNTQVNSPSSS 526

  Fly  2423 TAP-------SSTKNLTEHDI----QERL----LSFHAANISYLQSRNKKATAALTSASPSQ--- 2469
            ..|       |....|::.:.    |:||    ::...|....|:|..:|........|..:   
Yeast   527 GIPKTPGALDSKKHKLSDEEYERKKQKRLEYERIALERAKQEELESLKQKLKLENERKSVLEDII 591

  Fly  2470 -KSNSSSGGSGTESKKSSKDKDEKRDKEKQLKKSKKEKK--------------KSKDKEKQKAAV 2519
             ::|........|:||..:.|:.||.|.|.:.:|::.:.              |...:.||....
Yeast   592 AEANKQKELQKEEAKKLVEAKEAKRLKRKTVSQSQRLEHNWNKFFASFVPNLIKKNPQSKQFDHE 656

  Fly  2520 NVNSTSQIVDTKKKTTQPSKPDSKSSIAPVLVPPSLPVATANGKTKHTAYNNVDQ--QQQQQMRR 2582
            |:...::.: .|..||:..|.||..:      ||.........|.|....:.:|:  .:::|.:.
Yeast   657 NIKQCAKDI-VKILTTKELKKDSSRA------PPDDLTKGKRHKVKEFINSYMDKIILKKKQKKA 714

  Fly  2583 RTMSMCITPVTPTPVVTPSPLHGTPPST 2610
            ..:|...|.::       ||    ||||
Yeast   715 LALSSASTRMS-------SP----PPST 731

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
upSETNP_001261819.1 PHD_MLL5 856..899 CDD:277025
SET <1221..1273 CDD:214614
SET2NP_012367.2 AWS 64..119 CDD:197795 8/84 (10%)
SET_SETD2 119..260 CDD:380949 31/173 (18%)
SET 215..695 CDD:225491 109/541 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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