DRSC/TRiP Functional Genomics Resources

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Protein Alignment upSET and PHF20L1

DIOPT Version :9

Sequence 1:NP_001261819.1 Gene:upSET / 39551 FlyBaseID:FBgn0036398 Length:3146 Species:Drosophila melanogaster
Sequence 2:XP_011515377.1 Gene:PHF20L1 / 51105 HGNCID:24280 Length:1023 Species:Homo sapiens


Alignment Length:884 Identity:176/884 - (19%)
Similarity:307/884 - (34%) Gaps:253/884 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   377 ASPNVTGGGYLLQQSQAAVGGTIKFVNSHGTVIQQHPQQQQATKRTHYNSSGSSDNEQHAVAN-- 439
            |:|:|.....|...|:..||..::.|..   ::...|:...:.||.  |:.|:|...:.|..|  
Human   227 ATPDVEKKEDLPTSSETFVGLHVENVPK---MVFPQPESTLSNKRK--NNQGNSFQAKRARLNKI 286

  Fly   440 SSLITDDVMIVNGTQMTD---ELSARILQSMAQKSFSQQQRFHQVPATGSGNMPPPTQIIYSNST 501
            :.|:....:.|:|.:..:   |.:..:.|:::.|  .|.|:.::...:.|.|...|.  :.|::.
Human   287 TGLLASKAVGVDGAEKKEDYNETAPMLEQAISPK--PQSQKKNEADISSSANTQKPA--LLSSTL 347

  Fly   502 SNGAAASSPGGNASGNMLLAHYQAAG-----TKPVS---------------SASFITVTGTP-PV 545
            |:|.|.|....:.||:       ::|     ..|:|               |:|.|..|..| ||
Human   348 SSGKARSKKCKHESGD-------SSGCIKPPKSPLSPELIQVEDLTLVSQLSSSVINKTSPPQPV 405

  Fly   546 T----------------VATTPSVSISSHGFASGSAAISSYMSSATAARRQSVSAPSSRAVSLER 594
            .                :||.|....|....:|.|.|....:.|.::..:|..|.|....|:   
Human   406 NPPRPFKHSERRRRSQRLATLPMPDDSVEKVSSPSPATDGKVFSISSQNQQESSVPEVPDVA--- 467

  Fly   595 KQHHQQLQHDVIGGGRKAPTV-IEYYNKHGVNSIVGSSNNL------AQSNSMSNLAGPRSNS-- 650
               |..|:       :..|.: ::......|.:.|.|.::.      |:......|..|.|.:  
Human   468 ---HLPLE-------KLGPCLPLDLSRGSEVTAPVASDSSYRNECPRAEKEDTQMLPNPSSKAIA 522

  Fly   651 -GSGFATTTPTPATPLHLTPVNVPVHVEAAPPSSPALVKGSSQPPA----------QPQQQQQQA 704
             |.|      .||. ..::.....|.:|  ..||.|..|...:...          :|:|::::.
Human   523 DGRG------APAA-AGISKTEKKVKLE--DKSSTAFGKRKEKDKERREKRDKDHYRPKQKKKKK 578

  Fly   705 HPLGPNQLNANDEELYIEEVRPVPVLTQDLRLQQLHAIMQDHTYASQQQQQQPQQAAGDTTNPGA 769
            ......|.:.:|.|              |..|:.|.......|.:|.............||.   
Human   579 KKKKSKQHDYSDYE--------------DSSLEFLERCSSPLTRSSGSSLASRSMFTEKTTT--- 626

  Fly   770 AQQVQQPQQWSLGGIGVTVSGSQGTPTAVGGYCSYFGQQIARSQAD--DDAHSAISSSSRMGLAS 832
                   .|:....:.|.:||..                  .|..|  ||     ||:..:.|:.
Human   627 -------YQYPRAILSVDLSGEN------------------LSDVDFLDD-----SSTESLLLSG 661

  Fly   833 TDIDPGEETETAPEAEAEDDS---VTRCICELTHDDGYMICCDKCSAWQHVDCMGIDRQNIPEEY 894
            .:.:...::....|::.|||:   :.|||||:..::|:||.|::|..|||..|||:..::|||:|
Human   662 DEYNQDFDSTNFEESQDEDDALNEIVRCICEMDEENGFMIQCEECLCWQHSVCMGLLEESIPEQY 726

  Fly   895 MCELCQPRAVDKARARALQRQKR--------------KE-------------HMLLVATQAANGA 932
            :|.:|  |.....|..|..|..:              ||             |.||....   |.
Human   727 ICYIC--RDPPGQRWSAKYRYDKEWLNNGRMCGLSFFKENYSHLNAKKIVSTHHLLADVY---GV 786

  Fly   933 AAVAAGTTLSGGL-------------GSGLPMSEELQHRLASGLNGGFATGTGMSKKSKKTKENS 984
            ..|..|..|..|:             .||   ..:.|.::.:|:....|..| ::::.||..:|.
Human   787 TEVLHGLQLKIGILKNKHHPDLHLWACSG---KRKDQDQIIAGVEKKIAQDT-VNREEKKYVQNH 847

  Fly   985 GSTSTLKKTKKSAVGMGGEKNASGSGTPTGSSGKTSKKSSKRKSKSGGDGSS----GGGSSPALT 1045
                  |:..:..:.|.|             :..||:.|.::....|.|..|    |......::
Human   848 ------KEPPRLPLKMEG-------------TYITSEHSYQKPQSFGQDCKSLADPGSSDDDDVS 893

  Fly  1046 AAEKHAANLRQWIENYEYAVTNHYSPELRARLHA-------------------IQKQPSLLQSIQ 1091
            :.|:......:...:.:|:...|..||.:.....                   :|.|.:||..|:
Human   894 SLEEEQEFHMRSKNSLQYSAKEHGMPEKKNPAEGNTVFVYNDKKGTEDPGDSHLQWQLNLLTHIE 958

  Fly  1092 NTEN----------KALRQIQQQLSTAGSAEQLEQRAQL 1120
            |.:|          |.:..::..|...|..|..:..|:|
Human   959 NVQNEVTSRMDLIEKEVDVLESWLDFTGELEPPDPLARL 997

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
upSETNP_001261819.1 PHD_MLL5 856..899 CDD:277025 21/42 (50%)
SET <1221..1273 CDD:214614
PHF20L1XP_011515377.1 MBT 3..68 CDD:302657
TUDOR 90..135 CDD:119391
DUF3776 214..322 CDD:289391 22/101 (22%)
PHD20L1_u1 323..388 CDD:293265 14/73 (19%)
PHD_PHF20L1 688..733 CDD:277103 22/46 (48%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1844
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D147824at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.940

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