DRSC/TRiP Functional Genomics Resources

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Protein Alignment upSET and SPCC645.13

DIOPT Version :9

Sequence 1:NP_001261819.1 Gene:upSET / 39551 FlyBaseID:FBgn0036398 Length:3146 Species:Drosophila melanogaster
Sequence 2:NP_001342882.1 Gene:SPCC645.13 / 2538700 PomBaseID:SPCC645.13 Length:721 Species:Schizosaccharomyces pombe


Alignment Length:797 Identity:153/797 - (19%)
Similarity:266/797 - (33%) Gaps:231/797 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   843 TAPEAEAEDDSVTRCICELTHDDG-YMICCDKCSAWQHVDCMGIDRQNIPEEYMCELCQPRAVDK 906
            ||..:|...::|.||:|:...|.| ..:.||.|..|||..|:|:..::|||.|.||:|..|: |.
pombe     9 TAKASEKPPETVVRCVCKSQEDIGDTWVQCDGCDCWQHASCVGLADKDIPESYYCEVCHSRS-DV 72

  Fly   907 ARARALQRQKRKEHM---LLVATQA------ANGAAAVAAGTTLSGGLGSGLPMSEELQHRLASG 962
            :........|.:||.   ||.:.:.      .|...:..:...::...|:.|..||.    .::.
pombe    73 SSQVQNSPNKDEEHQTADLLASNEGNEKNNEENNVVSSDSKEAITKESGAELESSEP----ASTN 133

  Fly   963 LNGGFATGTGMSKKSKKTKENSGSTSTLKKTKKSAVGMGGEKNASGSGTPTGSSGKTSKKSSKRK 1027
            .|.|..|.:|  ::|.:|.  .|||     |.||:......:...||...|.:..|.||.:.|..
pombe   134 SNVGMTTRSG--RQSPRTP--IGST-----TPKSSHSPPSTRKRRGSVGTTATHTKRSKNAPKTS 189

  Fly  1028 SKSGGDGSSGGGSSPALTAAEKHAAN------LRQWIENYEYAV--------------------- 1065
            .|...:.::......:|..:.....|      .:.|:..:|..:                     
pombe   190 PKDASNETADQEKELSLHTSIDEIQNPVRKSVAKAWVSVFEKIIEKAKLEGVQGLEDLNSTSLAL 254

  Fly  1066 --------------------TNHYSPELRA-RLHAI-QKQPSL------------------LQSI 1090
                                .|.|..:.|| |.:.: .|.|:.                  .:.:
pombe   255 QLEHIMFMVLSYTTDHSLTPNNKYREKFRALRFNLVDDKNPAFRARVLKNEISFNDLVNLSSEEM 319

  Fly  1091 QNTENKALRQIQQQLSTAGSA---------------EQLEQRAQLIPYAGAKVLISSVDLSPHAP 1140
            .|.:.|.|.:..:|.||..:.               ::|.|:.:|      .:..:...:.|..|
pombe   320 ANPDLKNLAEEIRQQSTENTVIKQHLIAPRDRLLDEDKLTQQDEL------GIAENDDAMFPKPP 378

  Fly  1141 IHELRGKYMLTTQFRTQNPTVNMNTP--PPSNYL------NSFKAHKTPGQFVFFYQLPGVEAPM 1197
                 |:.:.......:.||::..:|  |..|.|      |..||.|..|.  |....|.|..|.
pombe   379 -----GELVAPISIAEEEPTIDSKSPTLPEHNPLSEDDTSNGDKAAKRKGS--FNDTKPIVNVPS 436

  Fly  1198 QTLRPDGSVPQVAQQPP---------SYLKGPEVCVDTRTYGNDARF----VRRSC----RPNAE 1245
            .....|.::..:.::.|         .|....::..::..:|...:.    |:.:.    ..|| 
pombe   437 IVEIDDPTILDIVEEEPLARNDSFSSPYSPAEDMAEESEFFGMKEKIWTGKVKMATVSEFHANA- 500

  Fly  1246 LQHYFEKGTLHLYIV----ALTHIRAQTEITIRHEPHDLTAVEQKKSHAAVIQPTSTRCACDMGS 1306
            |..:.:....||:.:    ||...|......:::. |.|.....|:..|.:..||...   ..|.
pombe   501 LNLFGDVSASHLFEILSATALIEGRISVSSVLQYF-HALRKTPSKEIIAVLFVPTEQN---SQGF 561

  Fly  1307 DCLFALPLAVQQQLQAPPTQPRSSHRNKAAAAAAAAAAANSAAAIQLTMGLGVGATVAAGASV-L 1370
            |.|:...:                .||:.....:.:.:...|..|.:..|..|...:.....| |
pombe   562 DILYDYFV----------------KRNRYGVLHSKSNSVKDAYIIPMPSGNSVPELLDLLPKVDL 610

  Fly  1371 PNSRN----------RSTSSSGESSQMGLNSPQLGQLNLGFKTSVTATSLTAPVPGVHCNNSGGS 1425
            |..||          ..:||..||.:                   .||.:|....|:        
pombe   611 PKDRNFQYFMGLFVLNKSSSRHESVE-------------------RATPITTSTNGI-------- 648

  Fly  1426 SSSSNNSCSVSMSSVLHDSGICTSSSSPSVS--IPSPTPTQM--------QSPTLQQHPQ----- 1475
             .|:..|.|.:.::.:|        |.||:.  |.:.||:.|        .:|.::.:|.     
pombe   649 -PSTYQSASGTPTNPVH--------SYPSLESIINALTPSDMLLIKDVVENNPQIRANPSLAINP 704

  Fly  1476 QIPQQQLSLLQRSPTQQ 1492
            |..|..:|..|:..::|
pombe   705 QFMQNAISAAQKKASKQ 721

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
upSETNP_001261819.1 PHD_MLL5 856..899 CDD:277025 19/43 (44%)
SET <1221..1273 CDD:214614 10/63 (16%)
SPCC645.13NP_001342882.1 PHD_SF 22..66 CDD:328929 19/43 (44%)
TFS2M 215..330 CDD:128786 13/114 (11%)
SPOC 474..624 CDD:311609 30/170 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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