DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment upSET and Y73B3A.1

DIOPT Version :9

Sequence 1:NP_001261819.1 Gene:upSET / 39551 FlyBaseID:FBgn0036398 Length:3146 Species:Drosophila melanogaster
Sequence 2:NP_508081.2 Gene:Y73B3A.1 / 180384 WormBaseID:WBGene00022203 Length:613 Species:Caenorhabditis elegans


Alignment Length:957 Identity:180/957 - (18%)
Similarity:273/957 - (28%) Gaps:398/957 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly  1583 VAQQQHVVGAQQQQHFLQQQQKQQQQQMADEARMAVSALQTLHAAPTSHIVSPIKVAAVQQQSQP 1647
            :|..:|.:.|.::. |.|...:|||.::|:...||...:|.:                    |:.
 Worm     1 MADGEHTLPADEEL-FEQPPPQQQQPEIAEPIVMAQEPIQGV--------------------SED 44

  Fly  1648 QQQQQNTHQQPHNQQAVQQQSNQLQQQQSQQPNYPQSPQRQQKPQPVQHQPQIVISTGAQAIPAT 1712
            .|..:.||:.|.|.....|..||...|:      ||.|:.||.||....||...           
 Worm    45 PQASEATHEAPDNYPVDHQMENQEFYQE------PQIPEPQQIPQISVFQPAAY----------- 92

  Fly  1713 MPTKLSSPTKSAAPVISNNNITVSAQSSVVGGKKTPAKHPQQQQQQQQQPVTPVSAATAPAATPS 1777
                  :|:...||....||....|.:..         .|..:::|        .||..|.|..:
 Worm    93 ------NPSNYVAPQQRANNFGEPAAADA---------RPLTEEEQ--------LAAEGPTADTA 134

  Fly  1778 SSESKED-DVSASSTTTPTTRTPAKDKPKQSREDRKLEAILRAIEKMEKQEARGKKDTRQSSGGK 1841
            ..:|.:| ||.                          ||||||...:...:              
 Worm   135 WIDSDDDTDVE--------------------------EAILRANFWLPYSD-------------- 159

  Fly  1842 RQASNSPASPNKRNSSNSISEDVETPTSTNSAAAAAQRRNKKKRKVSRSLNNNTNGLGSGGGSNN 1906
              .:..|..|..|         :..||.......|                    ||        
 Worm   160 --HNYDPPDPADR---------IILPTEGPFPCIA--------------------GL-------- 185

  Fly  1907 KRRKSIVVESDGESHALTNSESEDQGQHPQSHHSGSEDQAAGLLLALAHNNSSPNEPFKSPLSQS 1971
                      |.:.:.:.....||                       |....||...::......
 Worm   186 ----------DEDCNIVKQWMPED-----------------------AVGPGSPGTQYRRNQQTG 217

  Fly  1972 HSLPATPASVSSACLLIEAAMGPLQQQPAPASAS----PSLAEFKYPPGGAKTKKSLMSSWFQQA 2032
            ..||:|             ::.| |||..|...:    |.:|...:..||            .|.
 Worm   218 GGLPST-------------SVAP-QQQQLPVRHNIQNRPMVAAQPFSIGG------------NQV 256

  Fly  2033 EQQHASGLDSLVQAAMSEINGEREQLQRQPQ-------GESLPAPALLKVEQFIHQAESTTAVPA 2090
            |.....|:||.:|        :|..::..||       |..||...     |....:.:..|..|
 Worm   257 EYGGIGGMDSRMQ--------QRGVVRDGPQYRVMNDFGNGLPMRG-----QLPRNSPAANATAA 308

  Fly  2091 REQLHLPLQNNSSVKKRWLRQAISEETTPVDELQQSQNQSVTATPSPQPVP---------TVSPL 2146
            ||                                   :....:.|:|.|.|         |..|.
 Worm   309 RE-----------------------------------DAPEASIPAPAPSPPASRRSVSRTTQPS 338

  Fly  2147 ANGFSTPL-------KKRRLVVVSNGTNVESDETHIDVIGEPKDE---AEENVAMTELKVEI--- 2198
            .:.|:||.       :|||:|                   .||.|   :.:.|..||.|.:.   
 Worm   339 TSSFATPTEPPAKNQRKRRVV-------------------PPKSEPVLSAKRVRATEAKKKAVEK 384

  Fly  2199 --ENHHQEQDDDVDILRSPSPGTHQIVAEDNLVKIEPEDTSAAADDVKIDVEREESQACDKFEEM 2261
              |...:||       |.|:                                  ||....|.|:.
 Worm   385 VKEKEKKEQ-------RKPN----------------------------------ESGPAPKSEKA 408

  Fly  2262 VKVKREEEEQREKEIKQLQERQEHEQPKVEPAPVEPKLENT--VAKAEPKVEPSQEIVSKKEPTK 2324
            |:   :.||:.||:.|..|      :|..:|...:|.|:.|  |...|.:...|....|...|.|
 Worm   409 VE---KAEEKVEKKPKSPQ------KPPAKPTAQKPPLKKTEEVDGIEREASESSSKKSSVAPEK 464

  Fly  2325 VEPKP-------GESLLRSTATVTATPTAAT----IAATTLLDVSKVAFKTRPPLKLEDEPQKKK 2378
            ..||.       ..|..:..|...:||.|.|    |.:|...|:..|.....|   |:|.     
 Worm   465 KNPKKIAFVEYNSRSSRKRKAGECSTPPAVTRRGFIPSTEGEDLENVELSVIP---LDDH----- 521

  Fly  2379 PKLESILPAPVATVPPVSVPPIPAASNATTSAVTNTAAASLTTTTAPSSTKNL-TEH--DIQERL 2440
              |.|...||..|:    .|.:..|...|:..|.:.:..|.|...|..|..:. .||  .:|.|:
 Worm   522 --LSSSNTAPTTTI----APSVGGAPKPTSVVVKSPSTRSRTRGAASQSVDDAPAEHSMSLQGRV 580

  Fly  2441 LSFHAANISYLQSRNKKATAALTSASPSQKSNSSSGGSGTESKKSSK 2487
            |:...:.:.                :|.....:|:..:...|::|::
 Worm   581 LTMFGSTVD----------------APPPPPPASAETNSRRSRRSTR 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
upSETNP_001261819.1 PHD_MLL5 856..899 CDD:277025
SET <1221..1273 CDD:214614
Y73B3A.1NP_508081.2 PRK03427 <9..>132 CDD:235124 40/183 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1844
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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