DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment upSET and DIDO1

DIOPT Version :9

Sequence 1:NP_001261819.1 Gene:upSET / 39551 FlyBaseID:FBgn0036398 Length:3146 Species:Drosophila melanogaster
Sequence 2:XP_011526806.1 Gene:DIDO1 / 11083 HGNCID:2680 Length:2276 Species:Homo sapiens


Alignment Length:2605 Identity:476/2605 - (18%)
Similarity:790/2605 - (30%) Gaps:881/2605 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   575 TAARRQSVSAPSSRAVSLERKQHHQQLQHDVIGGGR--KAPTVIEYY----NKHGVNSIVGSSNN 633
            |.|:|:  .|..:.|..||.....|||...:...||  |....:|.:    .:.|..|:      
Human    33 TIAKRE--GAGDAEADPLEPPPPQQQLGLSLRRSGRQPKRTERVEQFLTIARRRGRRSM------ 89

  Fly   634 LAQSNSMSNLAGPRSNSGSGFATTTP-TPATPLHLTPVNVPVHVEAAPPSSPALVKGSSQPPAQP 697
                        |.|...||..|:.| |.|.......|.......:.|.|:...||   :.||..
Human    90 ------------PVSLEDSGEPTSCPATDAETASEGSVESASETRSGPQSASTAVK---ERPASS 139

  Fly   698 QQQQQQAHPLGPNQLNANDEE---LYIEEV--------------RPVPVLTQDLRLQQLHAIMQD 745
            ::.:.     |.:..:.:|.:   |.::|:              ||:..:...||          
Human   140 EKVKG-----GDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERPLKGIQSRLR---------- 189

  Fly   746 HTYASQQQQQQPQQAAG----DTTNPGAAQQVQQPQQWSLGGIGVTVSGSQGTPTAVGGYCSYFG 806
                .:::::.|.:..|    ||.. |.....|:|:            ..||..:..|       
Human   190 ----KKRREEGPAETVGSEASDTVE-GVLPSKQEPE------------NDQGVVSQAG------- 230

  Fly   807 QQIARSQADDDAHSAISSSSRMGLASTDI---DPGEETETAPEAEAEDDSVTRCICELTHDDGYM 868
                    .||..|.:.     |.|:.||   :||:.....||.|..|.:...|||...|::.:|
Human   231 --------KDDRESKLE-----GKAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFM 282

  Fly   869 ICCDKCSAWQHVDCMGIDR------QNIPEEYMCELCQPRAV-DKARARALQRQKRKEHMLLVAT 926
            ||||:|..|.|.||:||..      :...|:|:|..|....| |:..:....:|:.|..     .
Human   283 ICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILQVQDETHSETADQQEAKWR-----P 342

  Fly   927 QAANGAAAVAAGTTLSGGLGSGLPMSEELQHRLASGLNGGF--ATGTGMSKKSKKTKENSGSTST 989
            ..|:|....:.||.             |.:.....|:.|..  |......||.|..:...|...|
Human   343 GDADGTDCTSIGTI-------------EQKSSEDQGIKGRIEKAANPSGKKKLKIFQPGPGPVPT 394

  Fly   990 ----LKKTKKSAVGMG------------------GEKNASGSG-----TPTG------------- 1014
                |.:..:.||...                  |.....|.|     .|..             
Human   395 QLPVLWQVLEIAVSRSISAFTLLHCISCKVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILKHAA 459

  Fly  1015 ------SSGKTSKKSSKRKSKSGGD-------GSSGG---GSSPALTAAEKHAANLRQ------- 1056
                  ||||..|...|.|.|...:       |:..|   .|.....|.||....:::       
Human   460 ATMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVKKAVVVPAR 524

  Fly  1057 ----------------WIENYEYAVTNHYSPELRARLHAIQKQPSLL-----QSIQNTENKALRQ 1100
                            |..::.|   |...||..|     ...||||     :..::.|..|...
Human   525 SEALGKEAACESSTPSWASDHNY---NAVKPEKTA-----APSPSLLYKSTKEDRRSEEKAAAMA 581

  Fly  1101 IQQQLSTAGSA--EQLEQRAQLIPYAGAKVLISSVDLSPHAPIHELRG----KYMLTTQFRTQNP 1159
            ..::.:..|||  :|...| .|:|...:...:::...:...|....:|    :..|:....:...
Human   582 ASKKTAPPGSAVGKQPAPR-NLVPKKSSFANVAAATPAIKKPPSGFKGTIPKRPWLSATPSSGAS 645

  Fly  1160 TVNMNTPPPSNYLNSFKAHKTPGQ--FVFFYQLPGV-EAPMQTLRPD--GSVPQVAQQPPSYLKG 1219
            ......|.|:....:.|  |.||.  .|...:.|.| ..||.:..|.  |::.....||.|.:: 
Human   646 AARQAGPAPAAATAASK--KFPGSAALVGAVRKPVVPSVPMASPAPGRLGAMSAAPSQPNSQIR- 707

  Fly  1220 PEVCVDTRTYGNDARFVRRSC------RPN------------AELQHYFEKGTLHLYIV------ 1260
                          :.:|||.      |.|            .::..:.||...:|:.|      
Human   708 --------------QNIRRSLKEILWKRVNDSDDLIMTENEVGKIALHIEKEMFNLFQVTDNRYK 758

  Fly  1261 ----------------ALTHIRAQTEIT----IRHEPHDLTAVE---QKKSHAAVIQPTSTRCAC 1302
                            .|.|...:.||:    :|.:|.:|.:.|   .|:..|..:..:.|:   
Human   759 SKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKERPARSVMESRTK--- 820

  Fly  1303 DMGSDCLFALPL--AVQQQLQAPPTQPRSSHRNKAAAAAAAAAA---------------ANSAAA 1350
             :.::.....|.  |:.....:||.......:..|.|....:.|               .:.|..
Human   821 -LHNESKKTAPRQEAIPDLEDSPPVSDSEEQQESARAVPEKSTAPLLDVFSSMLKDTTSQHRAHL 884

  Fly  1351 IQLTMGLGVGATVAAGASVLPNSRNRSTSSSGESSQMGLNSPQLGQLNLGFKTSVTATSLTAPVP 1415
            ..|...:..|...:|.....|..:..|.|...|..:...:|                   :||.|
Human   885 FDLNCKICTGQVPSAEDEPAPKKQKLSASVKKEDLKSKHDS-------------------SAPDP 930

  Fly  1416 GVHCNNSGGSSSSSNNSCSVSMSSVLHDSGICTSSSSPSV-----------SIPSPTPTQMQSP- 1468
                     :..|::.....::..|..:.|: .|:|.|:|           ..|.|:|.:..|| 
Human   931 ---------APDSADEVMPEAVPEVASEPGL-ESASHPNVDRTYFPGPPGDGHPEPSPLEDLSPC 985

  Fly  1469 ------------TLQ-QHPQQIPQQQLSLLQRS---PTQQHQQQILAALPTPMLTPMLSPQ--LP 1515
                        |:. :.|:..|....:.:..:   |...|..:....:|.|:||.::.|:  |.
Human   986 PASCGSGVVTTVTVSGRDPRTAPSSSCTAVASAASRPDSTHMVEARQDVPKPVLTSVMVPKSILA 1050

  Fly  1516 KPAQ--QQAHVVLPQSQQTSLLQQQQSQQSQEPLAV---------------IAAAAAAQQPMATY 1563
            ||:.  ...::.:|.|...|..:.:...:....|.:               :|.......|::..
Human  1051 KPSSSPDPRYLSVPPSPNISTSESRSPPEGDTTLFLSRLSTIWKGFINMQSVAKFVTKAYPVSGC 1115

  Fly  1564 FVRQPQQQQQQQSPKPQALVAQQQHVVG-----------------AQQQQHFLQQQQKQQQQQMA 1611
            |       .......|..:     |:.|                 ..::...::.....:::::|
Human  1116 F-------DYLSEDLPDTI-----HIGGRIAPKTVWDYVGKLKSSVSKELCLIRFHPATEEEEVA 1168

  Fly  1612 ---------DEARMAVSALQTLHA---------------------------APTSHIVSPIKVAA 1640
                     ...|..|.|....|.                           :|..:|:  :.:..
Human  1169 YISLYSYFSSRGRFGVVANNNRHVKDLYLIPLSAQDPVPSKLLPFEGPGLESPRPNII--LGLVI 1231

  Fly  1641 VQQQSQPQQQQQNTHQQPHNQQAVQQQSNQLQQQQSQQPNYPQ---SPQRQQKPQ--PVQHQPQI 1700
            .|:..:|....:        ...:.::..:||.:::..|.||:   .||.::||.  |:......
Human  1232 CQKIKRPANSGE--------LDKMDEKRTRLQPEEADVPAYPKVATVPQSEKKPSKYPLCSADAA 1288

  Fly  1701 VIST--GAQAIPATMP----TKLSSPTKSAAPVISNNNITVSAQSSVV-----GGKKT--PAKHP 1752
            |.:|  |:...|..:|    .|:.|..|.|||..:....|.:|.|:..     ...||  |.:|.
Human  1289 VSTTPPGSPPPPPPLPEPPVLKVLSSLKPAAPSPATAATTAAAASTAASSTASSASKTASPLEHI 1353

  Fly  1753 QQQQQQQQQPVTPVSAATAPAATPSSSE----SKEDDVSASSTTTPTTR---TPAKDKPKQSRED 1810
            .|....:::...| ||...|.:|....:    :.||.|.|.....|..:   ..:|||..:..||
Human  1354 LQTLFGKKKSFDP-SAREPPGSTAGLPQEPKTTAEDGVPAPPLLDPIVQQFGQFSKDKALEEEED 1417

  Fly  1811 RKLEAILRAIEKMEKQEARGKKDTRQSSGGKR-QASNSP-ASPNKRNSSNSISEDVETPTSTNSA 1873
            .      |..:..|:.:.....||:....|:| :...:| |:..:|   ..::.|.|..|....|
Human  1418 D------RPYDPEEEYDPERAFDTQLVERGRRHEVERAPEAAAAER---EEVAYDPEDETILEEA 1473

  Fly  1874 ----------AAAAQRRNKKKRKVSRSLNNNTNGLGSGGGSNNKRRKSIVVESDGESHALTNSES 1928
                      ..|..|||..:|.........|..|               ||.......| |.:.
Human  1474 KVTVDDLPNRMCADVRRNSVERPAEPVAGAATPSL---------------VEQQKMLEEL-NKQI 1522

  Fly  1929 EDQGQHPQSHHSGSEDQAAGLLLALAHNNSSPNEPFKSPLSQSHSLPATPASVSSACLLIEAAMG 1993
            |:|.:..:........|.|.:.:::||                       .|||.|.:       
Human  1523 EEQKRQLEEQEEALRQQRAAVGVSMAH-----------------------FSVSDALM------- 1557

  Fly  1994 PLQQQPAPASASPSLAEFKYPPGGAKTKKSLMSSWFQQAEQQHASGLDSLVQAAMSEINGEREQL 2058
                .|.|.|:.|. ||.                 ||| |||.|....||..|:.:..:.:..|.
Human  1558 ----SPPPKSSLPK-AEL-----------------FQQ-EQQSADKPASLPPASQASNHRDPRQA 1599

  Fly  2059 QRQPQGESLPAPALLKVEQFIHQAESTTAVPAR-EQLHLPLQNNSSVKKRWLRQAISEETTPVDE 2122
            :|            |..|....:.|..:.:.|| .|..||                        |
Human  1600 RR------------LATETGEGEGEPLSRLSARGAQGALP------------------------E 1628

  Fly  2123 LQQSQNQSVTATPSPQP---VPTVSPLANGFSTPLKKRRLVVVSNGTNVESDE-THIDVIGEPKD 2183
            ...|:...|...|.|.|   .|..||.|:|...|....:     :|...|..| |....:|:...
Human  1629 RDASRGGLVGQAPMPVPEEKEPASSPWASGEKPPAGSEQ-----DGWKAEPGEGTRPATVGDSSA 1688

  Fly  2184 EAEENVAMTELKVEIENHHQEQDDDVDILRSPSPGTHQIVAEDNLVKIEPEDTSAAADDVKIDVE 2248
            .....|                     :|.:|..|.           ::|      ...::.|.|
Human  1689 RPARRV---------------------LLPTPPCGA-----------LQP------GFPLQHDGE 1715

  Fly  2249 REESQACDKFEEMVKVKREEEEQREKEIKQLQERQEHEQPKVEPAPVEPKLENTVAKAEPKVEPS 2313
            |:.. .|..|           ..::|.:...|    :|.|:            .:..|.....|:
Human  1716 RDPF-TCPGF-----------ASQDKALGSAQ----YEDPR------------NLHSAGRSSSPA 1752

  Fly  2314 QEIVSKKEPTKVEPKPGESLLRSTATVTATPTAATIAATTLLDVSKVAFKTRPPLKLEDEPQKKK 2378
            .|....:||   :.:|||      .|....|....:..            ::||.:.:.||....
Human  1753 GETEGDREP---QARPGE------GTAPLPPPGQKVGG------------SQPPFQGQREPGPHA 1796

  Fly  2379 PKLESILPAPVATVPPVSVPPIPAASNATTSAVTNTAAASLTTTTAPSSTKNLTEHDIQERLLSF 2443
            ..: |.|..|....|....||.|..:.|:.........|.......|..:           |.|.
Human  1797 LGM-SGLHGPNFPGPRGPAPPFPEENIASNDGPRGPPPARFGAQKGPIPS-----------LFSG 1849

  Fly  2444 HAANISYLQSRNKKATAALTSASPSQKSNSSSGGSGTESKKSSKDKDEKRDKEKQLKKSKKEKKK 2508
            ......|..||         ..|||.    ..|..|....:..:.||...:|             
Human  1850 QHGPPPYGDSR---------GPSPSY----LGGPRGVAPSQFEERKDPHGEK------------- 1888

  Fly  2509 SKDKEKQKAAVN--VNSTSQIVDTKKKTTQPSKPDSKSSIA----PVL---------VPPS---- 2554
               :|.|.|..|  ..:.:|...|::.....|:..:.....    |:|         .|||    
Human  1889 ---REFQDAPYNEVTGAPAQFEGTEQAPFLGSRGGAPFQFGGQRRPLLSQLKGPRGGPPPSQFGG 1950

  Fly  2555 -----------------LPVATANGK-------TKHTAYN------NVDQQQQQQMRRRTMSMCI 2589
                             ....||.|.       .:..|.|      .:..||.:..|..      
Human  1951 QRGPPPGHFVGPRGPHPSQFETARGPHPNQFEGPRGQAPNFMPGPRGIQPQQFEDQRVH------ 2009

  Fly  2590 TPVTPTPVVTPSP-----LHGTPP-STKKRQT----NFE---QELTKPNSQILSSSILLNSSKGL 2641
            :|...|....|:|     |.|:.| |.|..||    :|:   .::.||..:.|           |
Human  2010 SPPRFTNQRAPAPLQFGGLRGSAPFSEKNEQTPSRFHFQGQAPQVMKPGPRPL-----------L 2063

  Fly  2642 GLPLAAPTVVSVPTAVQQQQHRKENNHQEATPASG--------GPMS----LAAAIASGKLNAIS 2694
            .||...|            ||||: ..:||.|.|.        ||.:    .:|....||  ...
Human  2064 ELPSHPP------------QHRKD-RWEEAGPPSALSSSAPGQGPEADGQWASADFREGK--GHE 2113

  Fly  2695 RRRESMCGSRQQQALIAAALKKEKKEKKKSKKKDREKQKHDKQKGKEKEREKD----------KE 2749
            .|.::..|.::::..:..  |::..|:..::.:..|.::.::::|:...||:|          ::
Human  2114 YRNQTFEGRQRERFDVGP--KEKPLEEPDAQGRASEDRRRERERGRNWSRERDWDRPREWDRHRD 2176

  Fly  2750 KDNKQ 2754
            ||:.:
Human  2177 KDSSR 2181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
upSETNP_001261819.1 PHD_MLL5 856..899 CDD:277025 19/48 (40%)
SET <1221..1273 CDD:214614 13/95 (14%)
DIDO1XP_011526806.1 TNG2 <160..302 CDD:227367 44/188 (23%)
PHD_DIDO1_like 266..319 CDD:277109 19/52 (37%)
TFS2M 708..809 CDD:128786 18/100 (18%)
SPOC 1093..1199 CDD:285043 11/117 (9%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.030

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