DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nprl3 and nprl-3

DIOPT Version :9

Sequence 1:NP_001261818.1 Gene:Nprl3 / 39550 FlyBaseID:FBgn0036397 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_501396.1 Gene:nprl-3 / 185331 WormBaseID:WBGene00018072 Length:511 Species:Caenorhabditis elegans


Alignment Length:615 Identity:149/615 - (24%)
Similarity:253/615 - (41%) Gaps:146/615 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 AVILVYFDSKGDRLLYRYPYQTLGQTEVANDEQRKSRKRNP-YAVANTDDLLQTPTH-LGAAKSQ 71
            ||:.......|::::..||::.......:.|.|..|  .|| ..|......::.|:: .|...::
 Worm    16 AVMCFLTGQSGEKIVSIYPHRKPATKAPSKDPQPSS--SNPGQCVKPVLTSVKDPSYGFGRVDTE 78

  Fly    72 GQLQ-GFADEVLSALFAVKPQLCNQKFELKLNDVRFVSHPTLIPQKEQRSGPMAKQQMLINIVFA 135
            ..:. |    :|:.:|..:...||..|::|:|:.|||::    |:..:..|.....|  |:||||
 Worm    79 FDMSLG----MLAYVFKTQEIACNDGFDMKINNQRFVAY----PKTWKARGESTNYQ--ISIVFA 133

  Fly   136 LHAQASYSIVKCYHELSKRLGLALKFEEQRSGYLTEQTAQMARTHDEQQQQPLERTLELIAERCS 200
            |...........|..||.::.::|...:...|:|..:........:..:..|||.    .|:...
 Worm   134 LKNGCEQHTASAYQTLSNKIAVSLVMLQNYFGFLEREDKWADNAEEPNKDHPLEE----FAKTSF 194

  Fly   201 LAQALRSIFHDLCTTGLLSTSLNHNLTLCFCLPAKAHQLHK-----KGSMVDPETIDRCLRALKP 260
            :.|.|..:|.::...|.:...|.:.:.|.||  .:||.|.|     ||.    :.||..:|.:||
 Worm   195 IVQPLAEMFEEVRNRGNIHKYLINFVELGFC--DEAHALTKLNVVPKGR----QEIDEIVRKMKP 253

  Fly   261 YHGMLLLVDFAELLDCVPPTGARMLWQLVDVYDPLISLQSMSSNADLSIEHVYKLVSHLVYWAKA 325
            |||:|||.|.....|..|     ::.:|:....|..|:..||:.:.:.|..|:.::.||:.|.:|
 Worm   254 YHGILLLEDVWPTPDANP-----IVAKLLSHCSPDRSILDMSTASGIPIFEVFMIIRHLLQWTRA 313

  Fly   326 TIIYPLCETNVYVIAPD-APLHTKSHLVEKFSARFAG-MSLFEVISDFSLPTSIG---HLTTPLQ 385
            .:|||||.||:|..|.. .||   ..:.|||:|:|.. :.|...::.|:.|.::.   ....||.
 Worm   314 ILIYPLCNTNIYTSATSPQPL---DKMAEKFTAQFGNTIHLAAGLAHFNPPKTLDTFIRKNLPLH 375

  Fly   386 QPARQGILAQMVIWMLQHHLLMQLHTY--------VQFMPSEDEFGDSASCSNHLRDAISDEEGD 442
            :   ||:.|::|:.:|:|.:|||||.:        :..:|...|                     
 Worm   376 E---QGVRAKLVVALLRHQMLMQLHQFYYILKPYSIAILPEPKE--------------------- 416

  Fly   443 QEPDADELHGSMLSMSSHPLPVPAVLVGGHRREASE--DHSSLASDNIAVQPSSSHKSNFSITAS 505
                                |.||        |.::  :.|:|.:|                ...
 Worm   417 --------------------PCPA--------EFTKIIEESTLPND----------------VKG 437

  Fly   506 MSTDNCDSLDSMEDEQKLKELLQVFSDADRAAIRRIPASANVDDLSLLVKLYQMGYFKSEHHLEE 570
            :..|.|            .|:|:..|   .|:::|        .|||.||:..|  ....|||||
 Worm   438 VVADIC------------AEMLETTS---YASVKR--------TLSLFVKVAPM--MDGNHHLEE 477

  Fly   571 IMYFENLRRSQLLQLLDKFRDVLIIYETED 600
            |.|..||.|:::..:...|:.|:..:...|
 Worm   478 IKYKNNLDRTEIEGVFVSFKLVIATFRRPD 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nprl3NP_001261818.1 NPR3 76..413 CDD:305178 101/354 (29%)
nprl-3NP_501396.1 NPR3 <253..402 CDD:305178 53/159 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159589
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3830
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8091
Inparanoid 1 1.050 164 1.000 Inparanoid score I2824
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53225
OrthoDB 1 1.010 - - D260717at33208
OrthoFinder 1 1.000 - - FOG0006449
OrthoInspector 1 1.000 - - oto19554
orthoMCL 1 0.900 - - OOG6_104131
Panther 1 1.100 - - LDO PTHR13153
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R838
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.840

Return to query results.
Submit another query.