DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17359 and AT3G29340

DIOPT Version :9

Sequence 1:NP_648679.1 Gene:CG17359 / 39549 FlyBaseID:FBgn0036396 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_189580.1 Gene:AT3G29340 / 822592 AraportID:AT3G29340 Length:650 Species:Arabidopsis thaliana


Alignment Length:392 Identity:70/392 - (17%)
Similarity:118/392 - (30%) Gaps:141/392 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SQMCRVCRDESDCLLDI------------------YTEPYASSNRVQEQEPVLATMLRECSGCSV 50
            |..|::|....:|...:                  ::|.|...:::|:: |..::...||..|. 
plant    42 SHKCKICGKSFECYQALGGHQRIHRPIKEKLSKQEFSEVYPRKSKLQKR-PESSSSCYECKVCG- 104

  Fly    51 HKEDGMPQFICVECAEAVRNAYRLRRQCRKSHQYFEQLRLMMKELDDIEYCLNIGDNIEPQMPVS 115
             |..|        |...:....:|.|..:             :||...:...::.|:.|.:..||
plant   105 -KIFG--------CYRGLGGHTKLHRSTK-------------RELASTQDENSLLDSSEAKKIVS 147

  Fly   116 VMEAGKTPETSEPLLVELVQVKYMPPEPKPISSPLPDNNEHKLAQSYSPAKTPHNKSKRRARSYS 180
            ...:.|.  :.|...:..|::|....||...|..||.....||     ..||.            
plant   148 QPSSFKV--SQEEKFLHCVELKQDFSEPLSHSGALPSTLRSKL-----QTKTQ------------ 193

  Fly   181 DNDSWSPDSELEHEDDDKIWNASKRGKPKRVPGPYRCKLCTQSFTQKQNLEIHMRIH---TGE-- 240
                               |.:|           ..||:|.:||...|.|..|.|:|   :|:  
plant   194 -------------------WKSS-----------CHCKICGKSFVCSQGLGNHKRVHREISGKLA 228

  Fly   241 ---------RPYKCSLCPRSFAQK----------------------GNLQSHTRCHTGERPFGCP 274
                     .|:..||..:...:|                      |.|.:|:..   ::...|.
plant   229 CKRKYTEDYNPFSDSLKAKKIVKKPSSFEVSQEEKILHCVELKQDFGELLAHSGF---DKSISCS 290

  Fly   275 NCPKRFRQVGQLQVHTRTHT-------GEQPFK---CSKCQQSFKQLNGLQKHMSAHTRGKRRTS 329
            ...| .::|.:....|...|       ||...:   |..|.:.|..|.|:..|...|:....|..
plant   291 KSIK-VKKVARKNEKTEDSTSLFGVFVGEMSQRLHGCKTCGRKFGTLKGVYGHQRMHSGNHNRIE 354

  Fly   330 SQ 331
            .:
plant   355 DE 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17359NP_648679.1 zf-AD 6..88 CDD:285071 15/99 (15%)
zf-C2H2 215..237 CDD:278523 9/21 (43%)
C2H2 Zn finger 217..237 CDD:275368 9/19 (47%)
zf-H2C2_2 229..254 CDD:290200 8/38 (21%)
C2H2 Zn finger 245..265 CDD:275368 6/41 (15%)
zf-H2C2_2 257..282 CDD:290200 4/24 (17%)
C2H2 Zn finger 273..293 CDD:275368 4/19 (21%)
zf-H2C2_2 286..310 CDD:290200 7/33 (21%)
C2H2 Zn finger 301..321 CDD:275368 6/19 (32%)
AT3G29340NP_189580.1 zf-C2H2_6 43..68 CDD:290623 3/24 (13%)
C2H2 Zn finger 45..65 CDD:275368 3/19 (16%)
C2H2 Zn finger 100..120 CDD:275368 5/29 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24390
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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