DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17359 and zgc:175107

DIOPT Version :9

Sequence 1:NP_648679.1 Gene:CG17359 / 39549 FlyBaseID:FBgn0036396 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_001107104.1 Gene:zgc:175107 / 794317 ZFINID:ZDB-GENE-080220-38 Length:333 Species:Danio rerio


Alignment Length:205 Identity:72/205 - (35%)
Similarity:105/205 - (51%) Gaps:22/205 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 ETSEPLLVE-LVQVKYMPPEPK-PISSPLPDNNE-HKLAQSYSPAKTPHNKSKRRARSYSDNDSW 185
            |.||.|.:| ...||:...:.: .:::|..:..| ::|.:        .|:..:|..:..:..:.
Zfish     6 EESEDLKIEHTFTVKHEDRDKQTDLTAPKVERQETNELEE--------RNQYDKRDSAIGEKSTH 62

  Fly   186 SPDSELEHEDDDKIWNASKRGKPKRVPGPYRCKLCTQSFTQKQNLEIHMRIHTGERPYKCSLCPR 250
            :.|:.|           .||.:.....|.|.|..|.:||..|||||:|.|.||||:|:.|..|.:
Zfish    63 TQDASL-----------LKRPQSAESSGYYICGECNKSFGLKQNLEVHKRTHTGEKPFSCQQCGK 116

  Fly   251 SFAQKGNLQSHTRCHTGERPFGCPNCPKRFRQVGQLQVHTRTHTGEQPFKCSKCQQSFKQLNGLQ 315
            ||:||.||:.|.|.||||:||.||.|.:.|...|.|:.|.|.||||..|.|:.|.:||.:...|.
Zfish   117 SFSQKQNLKVHMRVHTGEKPFSCPFCGQNFTHKGNLKTHVRNHTGESAFICNLCGKSFSRKESLN 181

  Fly   316 KHMSAHTRGK 325
            .||..|:..|
Zfish   182 THMRIHSGEK 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17359NP_648679.1 zf-AD 6..88 CDD:285071
zf-C2H2 215..237 CDD:278523 12/21 (57%)
C2H2 Zn finger 217..237 CDD:275368 11/19 (58%)
zf-H2C2_2 229..254 CDD:290200 14/24 (58%)
C2H2 Zn finger 245..265 CDD:275368 10/19 (53%)
zf-H2C2_2 257..282 CDD:290200 14/24 (58%)
C2H2 Zn finger 273..293 CDD:275368 8/19 (42%)
zf-H2C2_2 286..310 CDD:290200 12/23 (52%)
C2H2 Zn finger 301..321 CDD:275368 7/19 (37%)
zgc:175107NP_001107104.1 C2H2 Zn finger 83..103 CDD:275368 11/19 (58%)
zf-H2C2_2 95..120 CDD:290200 14/24 (58%)
COG5048 <107..286 CDD:227381 39/85 (46%)
C2H2 Zn finger 111..131 CDD:275368 10/19 (53%)
zf-H2C2_2 123..148 CDD:290200 14/24 (58%)
C2H2 Zn finger 139..159 CDD:275368 8/19 (42%)
zf-C2H2 165..187 CDD:278523 8/21 (38%)
C2H2 Zn finger 167..187 CDD:275368 7/19 (37%)
C2H2 Zn finger 195..215 CDD:275368
C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368
zf-H2C2_2 264..287 CDD:290200
C2H2 Zn finger 279..299 CDD:275368
zf-H2C2_2 291..316 CDD:290200
C2H2 Zn finger 307..324 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588362
Domainoid 1 1.000 42 1.000 Domainoid score I12423
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.930

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