DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17359 and zgc:171604

DIOPT Version :9

Sequence 1:NP_648679.1 Gene:CG17359 / 39549 FlyBaseID:FBgn0036396 Length:339 Species:Drosophila melanogaster
Sequence 2:XP_009299290.1 Gene:zgc:171604 / 569282 ZFINID:ZDB-GENE-080219-37 Length:339 Species:Danio rerio


Alignment Length:217 Identity:72/217 - (33%)
Similarity:103/217 - (47%) Gaps:18/217 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 TPETSEPLLVELVQVKYMPPEPKP----ISSPLPDNNE---------HKLAQSYSPAKTPHNKSK 173
            |.|:..|.:.|:..:|:..||.:.    :.....:.||         |....:..|:....|.|.
Zfish    14 TEESEGPRITEVFTLKHEDPEEQTGLMVLKEETQELNEIEEKDQCGKHPDLMTDKPSLLAKNTSC 78

  Fly   174 RRARSYSDNDSWSPDSELEHEDDDKIWNASKRGKPKRVPGPYRCKLCTQSFTQKQNLEIHMRIHT 238
            :||.................:.:.||......|:....     |..|.:|||.|...|||||.||
Zfish    79 KRAEKTKSFPCHQCGKRFNKKQNLKIHMRIHTGEKLST-----CDQCGKSFTAKSGFEIHMRTHT 138

  Fly   239 GERPYKCSLCPRSFAQKGNLQSHTRCHTGERPFGCPNCPKRFRQVGQLQVHTRTHTGEQPFKCSK 303
            ||:|:.|:.|.:||:.|.||:.|...||||:||.|.:|.|||.|:|.|:||.|.|.||:|:.|.:
Zfish   139 GEKPFSCTECGKSFSHKQNLEIHKTIHTGEKPFACQHCGKRFSQMGNLKVHFRVHFGERPYTCQQ 203

  Fly   304 CQQSFKQLNGLQKHMSAHTRGK 325
            |.:||...:.|:.|...||..|
Zfish   204 CGKSFSHKHNLEIHKKIHTGEK 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17359NP_648679.1 zf-AD 6..88 CDD:285071
zf-C2H2 215..237 CDD:278523 11/21 (52%)
C2H2 Zn finger 217..237 CDD:275368 11/19 (58%)
zf-H2C2_2 229..254 CDD:290200 14/24 (58%)
C2H2 Zn finger 245..265 CDD:275368 8/19 (42%)
zf-H2C2_2 257..282 CDD:290200 14/24 (58%)
C2H2 Zn finger 273..293 CDD:275368 11/19 (58%)
zf-H2C2_2 286..310 CDD:290200 12/23 (52%)
C2H2 Zn finger 301..321 CDD:275368 6/19 (32%)
zgc:171604XP_009299290.1 COG5048 <79..234 CDD:227381 59/152 (39%)
C2H2 Zn finger 89..109 CDD:275368 2/19 (11%)
C2H2 Zn finger 117..137 CDD:275368 11/19 (58%)
C2H2 Zn finger 145..165 CDD:275368 8/19 (42%)
C2H2 Zn finger 173..193 CDD:275368 11/19 (58%)
C2H2 Zn finger 201..221 CDD:275368 6/19 (32%)
C2H2 Zn finger 229..249 CDD:275368
zf-H2C2_2 241..266 CDD:316026
C2H2 Zn finger 257..277 CDD:275368
C2H2 Zn finger 285..305 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588381
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.