DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17359 and LOC557537

DIOPT Version :9

Sequence 1:NP_648679.1 Gene:CG17359 / 39549 FlyBaseID:FBgn0036396 Length:339 Species:Drosophila melanogaster
Sequence 2:XP_009301868.1 Gene:LOC557537 / 557537 -ID:- Length:393 Species:Danio rerio


Alignment Length:215 Identity:72/215 - (33%)
Similarity:110/215 - (51%) Gaps:25/215 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 ETSEPLLVELVQVKYMPPEPKPISSPLPDNNEHKLAQSYSPAKTPHNKSKRRARSYSDNDSWSPD 188
            |.:|.:.|||:.:|    |...:...:.:|:::|....:        |::..:.|.||.:..|..
Zfish    22 EDAEQITVELIDLK----EETEVLIEVEENDQYKNHLGF--------KTEEASFSCSDTEKTSSQ 74

  Fly   189 SELEHEDDDKIWNASKRGKPKRV-------------PGPYRCKLCTQSFTQKQNLEIHMRIHTGE 240
            ...:....:|.:...:.||..|.             ..||.|:.|.:||:|....::|||||:||
Zfish    75 KRTQRSRGEKSFICQQCGKSFRQRKQLKIHTRIHTGEKPYSCQECGKSFSQSSARKVHMRIHSGE 139

  Fly   241 RPYKCSLCPRSFAQKGNLQSHTRCHTGERPFGCPNCPKRFRQVGQLQVHTRTHTGEQPFKCSKCQ 305
            :|:.|..|.:||.||.||..|.|.||||:|:.|..|.|.|.||..|::|.|.||||:||.|.:|.
Zfish   140 KPFTCEQCGKSFRQKKNLVGHRRIHTGEKPYTCTLCGKSFSQVAGLEIHMRIHTGEKPFTCQECG 204

  Fly   306 QSFKQLNGLQKHMSAHTRGK 325
            :||.....|:.||:.|:..|
Zfish   205 KSFNSKETLKCHMTVHSGEK 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17359NP_648679.1 zf-AD 6..88 CDD:285071
zf-C2H2 215..237 CDD:278523 9/21 (43%)
C2H2 Zn finger 217..237 CDD:275368 8/19 (42%)
zf-H2C2_2 229..254 CDD:290200 12/24 (50%)
C2H2 Zn finger 245..265 CDD:275368 10/19 (53%)
zf-H2C2_2 257..282 CDD:290200 13/24 (54%)
C2H2 Zn finger 273..293 CDD:275368 9/19 (47%)
zf-H2C2_2 286..310 CDD:290200 13/23 (57%)
C2H2 Zn finger 301..321 CDD:275368 7/19 (37%)
LOC557537XP_009301868.1 COG5048 62..>379 CDD:227381 62/163 (38%)
C2H2 Zn finger 88..108 CDD:275368 3/19 (16%)
zf-H2C2_2 101..125 CDD:290200 6/23 (26%)
C2H2 Zn finger 116..136 CDD:275368 8/19 (42%)
zf-H2C2_2 130..153 CDD:290200 12/22 (55%)
C2H2 Zn finger 144..164 CDD:275368 10/19 (53%)
zf-H2C2_2 156..181 CDD:290200 13/24 (54%)
C2H2 Zn finger 172..192 CDD:275368 9/19 (47%)
zf-H2C2_2 185..209 CDD:290200 13/23 (57%)
C2H2 Zn finger 200..220 CDD:275368 7/19 (37%)
C2H2 Zn finger 228..248 CDD:275368
C2H2 Zn finger 256..276 CDD:275368
FYDLN_acid 280..>319 CDD:302856
C2H2 Zn finger 284..304 CDD:275368
zf-C2H2 310..332 CDD:278523
C2H2 Zn finger 312..332 CDD:275368
C2H2 Zn finger 340..360 CDD:275368
zf-H2C2_2 352..377 CDD:290200
C2H2 Zn finger 368..387 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588300
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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