DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG17359 and CG1792

DIOPT Version :9

Sequence 1:	NP_648679.1	Gene:	CG17359 / 39549	FlyBaseID:	FBgn0036396	Length:	339	Species:	Drosophila melanogaster
Sequence 2:	NP_651878.1	Gene:	CG1792 / 43727	FlyBaseID:	FBgn0039860	Length:	372	Species:	Drosophila melanogaster

Alignment Length:	369	Identity:	86/369 - (23%)
Similarity:	138/369 - (37%)	Gaps:	76/369 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly     8 RVCRDESDCLLDIYTEPYASSNRVQEQEPVLATMLRECSGCSVHKEDG--MPQFICVECAEAVRN 70
            |.||   .|.|.|:..  ..||..:|...|:...:...:|..:....|  :|.|||..|...::.
  Fly     4 RNCR---TCGLFIFCS--TPSNLFEEPNSVMLHQIEVLTGLFLLGGPGNELPPFICSPCELDLQT 63

  Fly    71 AYRLRRQCRKSHQYFEQLRLMMKELDDIEYCLNIGDNIEPQMPVS-----------VMEAGKTPE 124
            |...|.:..::.:..::    ...|.:.|...:....:|.::..:           :.|.....|
  Fly    64 AIAFRERVIRTQKTLQE----SPNLGNAELIESFAVGVEKEIQYAEEVTEIEVIDLLPEEHLLEE 124

  Fly   125 TSEPLLVELVQVKYMPPEPKPISSPLPDNNEHKLAQSYSPAKTPHNKSKRRARSYSDNDSWSPDS 189
            |.||  .|:.:....|....|.       .|.||.:|.....|.....|....|.:....||..:
  Fly   125 TEEP--YEICEQNEQPQVKVPA-------QEKKLRRSTKTTPTVFTSVKFADNSQATRTQWSRLT 180

  Fly   190 ELEHEDDDKIWNASKRGKPKRVPGPYRCKLCTQSFTQKQNLEIHMRIHTGERPYKCSLCPRSF-- 252
            |     |:.:  |.||.:.||   ...|:.|.:.||...|.::|:..|||.:.:.|..|.:.|
  Fly   181 E-----DEVV--ALKRERRKR---DCICEQCGRHFTCPSNFKLHLLRHTGVKSFACDQCSQQFYT 235

  Fly   253 ---------------------------AQKGNLQSHTRCHTGERPFGCPNCPKRFRQVGQLQVHT 290
                                       ...|.:|.....||..:||.|..|.|.|...|:|:.|.
  Fly   236 ATLLRRHQELHAGNALFQCRYCEATYSNASGRIQHERMRHTNVKPFTCKECNKSFAMSGKLRTHM 300

  Fly   291 RTHTGEQPFKCSKCQQSFKQLNGLQKHMSAH--TRGKRRTSSQE 332
            .:|||.:.|.|..||.||.:    :.|:::|  ::|...|||.:
  Fly   301 LSHTGVRAFHCDSCQVSFVR----RSHLTSHYRSKGHAHTSSAQ 340

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG17359	NP_648679.1	zf-AD	6..88	CDD:285071	19/81 (23%)
		zf-C2H2	215..237	CDD:278523	6/21 (29%)
		C2H2 Zn finger	217..237	CDD:275368	6/19 (32%)
		zf-H2C2_2	229..254	CDD:290200	8/53 (15%)
		C2H2 Zn finger	245..265	CDD:275368	5/48 (10%)
		zf-H2C2_2	257..282	CDD:290200	9/24 (38%)
		C2H2 Zn finger	273..293	CDD:275368	7/19 (37%)
		zf-H2C2_2	286..310	CDD:290200	11/23 (48%)
		C2H2 Zn finger	301..321	CDD:275368	6/19 (32%)
CG1792	NP_651878.1	zf-AD	6..80	CDD:214871	18/78 (23%)
		C2H2 Zn finger	198..218	CDD:275368	6/19 (32%)
		C2H2 Zn finger	226..243	CDD:275368	3/16 (19%)
		C2H2 Zn finger	254..275	CDD:275368	2/20 (10%)
		zf-C2H2	281..303	CDD:278523	8/21 (38%)
		C2H2 Zn finger	283..303	CDD:275368	7/19 (37%)
		zf-H2C2_2	296..320	CDD:290200	11/23 (48%)
		C2H2 Zn finger	311..329	CDD:275368	7/21 (33%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	0	0.000