DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17359 and CG4424

DIOPT Version :10

Sequence 1:NP_648679.1 Gene:CG17359 / 39549 FlyBaseID:FBgn0036396 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster


Alignment Length:372 Identity:90/372 - (24%)
Similarity:153/372 - (41%) Gaps:80/372 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDISQMCRVCRDESDC-LLDIYTEPYASSNRVQEQEP---VLATMLRECSGCSVH---KEDGMPQ 58
            :::..:||.|..:.:. ::.|:       ....::.|   .|...:...||..:.   ||:.:|.
  Fly     5 LNMMTLCRTCLQDGEAHMVSIF-------QTADDRLPGGVSLCDKIESLSGIQIRATAKEEVLPT 62

  Fly    59 FICVECAEAVRNAYRLRRQCRKSHQYFEQLRLMMKELDDIEYCLNIGDNIEPQMPV--------- 114
            .||:.|...:..|::.|:.|::|:::..:  .::|:..:......:.....|..|.         
  Fly    63 RICLRCKAFLTLAHKFRQICQRSNEFLRE--YVIKDAVEQGVVKEVVQQTRPSTPPPIETEQLEP 125

  Fly   115 ---SVMEAG---------KTP----ETSEP--LLVELVQVKYMPPEPKPISSPLPDNNEHKLAQS 161
               .|:|.|         :||    |...|  |.||::...|.||...|                
  Fly   126 PEDEVLEEGVWSTEDPIEETPHGPAEKERPTVLTVEMLPAPYPPPASTP---------------- 174

  Fly   162 YSPAKTPHNKSKRRARSYSDND---SWSPDSELEHEDDDKIWNASKRGKPKRVPGPYRCKLCTQS 223
             .||.....|.|....:...|.   ..:.|:.:...:|::               ||.|::|.:|
  Fly   175 -PPAPAGAVKGKLHVCAICGNGYPRKSTLDTHMRRHNDER---------------PYECEICHKS 223

  Fly   224 FTQKQNLEIHMRIHTGERPYKCSLCPRSFAQKGNLQSHTRCHTGERPFGCPNCPKRFRQVGQLQV 288
            |.....|:.|:|.|||.:||.|..|.|:||.:.:|..|.|.|..|||:.|..|.|:|.....|::
  Fly   224 FHVNYQLKRHIRQHTGAKPYTCQYCQRNFADRTSLVKHERTHRNERPYACKTCGKKFTYASVLKM 288

  Fly   289 HTRTHTGEQPFKCSKCQQSFKQLNGLQKHMSA--HTRGKRRTSSQET 333
            |.:|||||:|..|..|.:||.:::.|..|:..  |....|.|:...|
  Fly   289 HYKTHTGEKPHICQLCNKSFARIHNLVAHLQTQQHINDPRLTAYLST 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17359NP_648679.1 zf-AD 6..88 CDD:462262 18/88 (20%)
SFP1 <131..317 CDD:227516 56/188 (30%)
C2H2 Zn finger 217..237 CDD:275368 7/19 (37%)
zf-H2C2_2 229..254 CDD:463886 12/24 (50%)
C2H2 Zn finger 245..265 CDD:275368 8/19 (42%)
C2H2 Zn finger 273..293 CDD:275368 6/19 (32%)
C2H2 Zn finger 301..321 CDD:275368 6/21 (29%)
CG4424NP_650859.3 zf-AD 10..92 CDD:462262 18/90 (20%)
C2H2 Zn finger 189..209 CDD:275368 2/19 (11%)
COG5048 210..>345 CDD:227381 49/141 (35%)
C2H2 Zn finger 217..237 CDD:275368 7/19 (37%)
C2H2 Zn finger 245..265 CDD:275368 8/19 (42%)
C2H2 Zn finger 273..293 CDD:275368 6/19 (32%)
C2H2 Zn finger 301..320 CDD:275368 6/18 (33%)

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