DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17359 and nom

DIOPT Version :10

Sequence 1:NP_648679.1 Gene:CG17359 / 39549 FlyBaseID:FBgn0036396 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_649821.2 Gene:nom / 41038 FlyBaseID:FBgn0037617 Length:370 Species:Drosophila melanogaster


Alignment Length:336 Identity:80/336 - (23%)
Similarity:124/336 - (36%) Gaps:71/336 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 MCRVCRDESDCLLDIYTEPYASSNRVQEQEPVLATMLRE---CSGCSVHKEDGMPQFICVECAEA 67
            :||||.....|       |.|    |:..:|....:||.   .:|..:.:....|..:|..|...
  Fly     5 VCRVCGRSRLC-------PKA----VELFKPGRQDILRRIQLITGILLQQIPNAPDMVCFCCQTD 58

  Fly    68 VRNAYRLRRQCRKSHQYFEQLRLMMKELDDIEYCLNIG----DNIEPQMPVSVMEAGKTPETSEP 128
            :::|...||||          .|..|:...:.....:|    ..:||..|.:..:..|.......
  Fly    59 LQSAMIFRRQC----------ILQQKKWVPLLQSDKVGASEEKKVEPNDPSTKKKTTKRRRGRPR 113

  Fly   129 LLVELVQVKYMPPEPKPISSPLPDNNEHKLAQSYSPAKTPHNKSKRRARSYSDNDSWSPDSELEH 193
            :.:|:|.:                              ...|:||..|......|.:....|:.:
  Fly   114 MPLEIVDI------------------------------VVTNESKASAGESVGGDEFDQPVEISN 148

  Fly   194 EDD--DKIWNASKRGKPKR--------VPGP--YRCKLCTQSFTQKQNLEIHMRIHTGERPYKCS 246
            |.|  |...|..:...|..        :|..  ::|..|......|.:|..|...|.|.|||.|.
  Fly   149 EPDATDSDVNLEEIDLPDEDGLESDHDLPNVQIHKCDTCGIIKNNKSSLVRHQFEHNGIRPYPCK 213

  Fly   247 LCPRSFAQKGNLQSHTRC-HTGERPFGCPNCPKRFRQVGQLQVHTRTHTGEQPFKCSKCQQSFKQ 310
            .||::|.....|::|... ||.|.||.|..|.:|:..|...:.|.|.||.|:||.|.:|.::|.:
  Fly   214 ECPKTFLVASELKAHNLTHHTLEPPFACRYCDRRYFSVVGRKKHERVHTNERPFVCDQCGKAFTR 278

  Fly   311 LNGLQKHMSAH 321
            ...|:.||:.|
  Fly   279 TCILKAHMAVH 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17359NP_648679.1 zf-AD 6..88 CDD:462262 20/84 (24%)
SFP1 <131..317 CDD:227516 50/198 (25%)
C2H2 Zn finger 217..237 CDD:275368 5/19 (26%)
zf-H2C2_2 229..254 CDD:463886 11/24 (46%)
C2H2 Zn finger 245..265 CDD:275368 6/20 (30%)
C2H2 Zn finger 273..293 CDD:275368 6/19 (32%)
C2H2 Zn finger 301..321 CDD:275368 6/19 (32%)
nomNP_649821.2 zf-AD 5..76 CDD:214871 22/91 (24%)
C2H2 Zn finger 184..204 CDD:275368 5/19 (26%)
C2H2 Zn finger 212..261 CDD:275368 17/48 (35%)
C2H2 Zn finger 269..289 CDD:275368 6/19 (32%)
C2H2 Zn finger 297..313 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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