DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17359 and Kr

DIOPT Version :10

Sequence 1:NP_648679.1 Gene:CG17359 / 39549 FlyBaseID:FBgn0036396 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_523867.1 Gene:Kr / 38012 FlyBaseID:FBgn0001325 Length:502 Species:Drosophila melanogaster


Alignment Length:329 Identity:90/329 - (27%)
Similarity:144/329 - (43%) Gaps:57/329 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 NRVQEQEPVLATMLRECSGCSVHKEDGMPQFICVECAEAVRNAYRLRRQCRKSHQYFEQLRLMMK 93
            :|.....|.::......|..:::...|:.| .....|..:.:..:|....|::..:..||.:.  
  Fly    29 DRSMSLSPPMSANTSATSAAAIYPAMGLQQ-AAAASAFGMLSPTQLLAANRQAAAFMAQLPMS-- 90

  Fly    94 ELDDIEYCLNIGDNIEPQMPVSVMEAGKTPETSEPLLVELVQVKYMPPEP--KPISSPLPDNNEH 156
                     .:.:.:.|..|.::..|....::..|....|    :.||..  .|:|:|| .:.:|
  Fly    91 ---------TLANTLFPHNPAALFGAWAAQQSLPPQGTHL----HSPPASPHSPLSTPL-GSGKH 141

  Fly   157 KLAQSYSPAKTP-HNKSKRRAR------------SYSDNDSW--------------SPDSELEHE 194
            .|   .||..|| |::..::||            |.|.||.:              ||:|    .
  Fly   142 PL---NSPNSTPQHHEPAKKARKLSVKKEFQTEISMSVNDMYHTSGGPISPPSSGSSPNS----T 199

  Fly   195 DDDKIWNASKRG---KPKRVPGPYRCKLCTQSFTQKQNLEIHMRIHTGERPYKCSLCPRSFAQKG 256
            .|....||...|   .|.| ...:.||:|::||..|..|:.|.|.||||:|::|..|.:.|.:..
  Fly   200 HDGAGGNAGCVGVSKDPSR-DKSFTCKICSRSFGYKHVLQNHERTHTGEKPFECPECHKRFTRDH 263

  Fly   257 NLQSHTRCHTGERPFGCPNCPKRFRQVGQLQVHTRTHTGEQPFKCSKCQQSFKQLNGLQKHMSAH 321
            :|::|.|.||||:|:.|.:|.::|.||..|:.|.|.||||:|:.|..|...|...|.|:.||..|
  Fly   264 HLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRVHTGERPYTCEICDGKFSDSNQLKSHMLVH 328

  Fly   322 TRGK 325
            ...|
  Fly   329 NGEK 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17359NP_648679.1 zf-AD 6..88 CDD:462262 8/58 (14%)
SFP1 <131..317 CDD:227516 72/217 (33%)
C2H2 Zn finger 217..237 CDD:275368 9/19 (47%)
zf-H2C2_2 229..254 CDD:463886 11/24 (46%)
C2H2 Zn finger 245..265 CDD:275368 6/19 (32%)
C2H2 Zn finger 273..293 CDD:275368 8/19 (42%)
C2H2 Zn finger 301..321 CDD:275368 7/19 (37%)
KrNP_523867.1 SFP1 <212..324 CDD:227516 45/112 (40%)
C2H2 Zn finger 224..244 CDD:275368 9/19 (47%)
zf-H2C2_2 237..261 CDD:463886 11/23 (48%)
C2H2 Zn finger 252..272 CDD:275368 6/19 (32%)
zf-H2C2_2 264..289 CDD:463886 11/24 (46%)
C2H2 Zn finger 280..300 CDD:275368 8/19 (42%)
C2H2 Zn finger 308..328 CDD:275368 7/19 (37%)
zf-H2C2_2 321..345 CDD:463886 5/12 (42%)
C2H2 Zn finger 336..352 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.