DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17359 and pita

DIOPT Version :10

Sequence 1:NP_648679.1 Gene:CG17359 / 39549 FlyBaseID:FBgn0036396 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_611806.3 Gene:pita / 37730 FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster


Alignment Length:425 Identity:107/425 - (25%)
Similarity:164/425 - (38%) Gaps:129/425 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RVCRDESDCLLDIYTEPYASSNRVQEQEPVLAT------MLRECSGCSVHKEDGMPQFICVECAE 66
            ||||   .||    ||...:|  :.|:.|.:.|      .:...:...|:..||||..||:||..
  Fly    16 RVCR---FCL----TEQKLAS--IFEENPRVKTTANLPLQIMAITAIEVYAGDGMPGHICLECRL 71

  Fly    67 AVRNAYRLRRQCRKSHQYFEQLRLMMKELDDIEYCLNIGDNIEPQMPVSVM-------------E 118
            ...:.||.::.|:::.....|..|.......:|         :|:.|::::             |
  Fly    72 LFEHCYRFKQMCKRAETLLRQYPLTGNWPSPLE---------KPRAPMTMVASKKLLVVPAKTAE 127

  Fly   119 AGKTP--------ETSEPLLVELVQV---KYMPPEPKPISSPLP----------DNNEH------ 156
            ..:||        ::|..:::|.|||   ..:.|.....|||:|          |||:.      
  Fly   128 PSETPKKLLNTMAKSSSQVIIEDVQVLESAMVTPRTVAGSSPVPRRSHAYELKVDNNQELSMDDV 192

  Fly   157 ----------------KLAQSYSPAKTPH--NKSKRRARSYSDNDSWSP---------------- 187
                            .:.|..||.| |.  |||..|..:........|                
  Fly   193 QSMLEDMASELEKEFPDIPQKASPVK-PKVLNKSSIRILNKGPAAPVEPRLATPKVKRDDSGNVA 256

  Fly   188 ------DSELEHED-DDKIWNASK------------RGKPKRV-----------PGPYRCKLCTQ 222
                  ||:|..:| ||...||.|            |..|.:.           ...::|.||.:
  Fly   257 IVTEVLDSDLPLDDQDDPTKNAEKVATDVFPCPDCERSFPLQQLLEIHRLNHTRSRSFQCLLCEK 321

  Fly   223 SFTQKQNLEIHMRIHTGERPYKCSLCPRSFAQKGNLQSHTRCHTGERPFGCPNCPKRFRQVGQLQ 287
            ||..|.:|..|..:||||||:||::|.::|.:|..|..|.|.||....|.|..|.|.|....:::
  Fly   322 SFFSKYDLAKHNFVHTGERPFKCAICSKAFTRKALLHRHERTHTDVPKFICVYCEKPFLSRQEME 386

  Fly   288 VHTRTHTGEQPFKCSKCQQSFKQLNGLQKHMSAHT 322
            .|...|..::||:|..|.:||....||::|.:.|:
  Fly   387 KHAERHQKKRPFQCGVCTKSFAFKQGLERHETVHS 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17359NP_648679.1 zf-AD 6..88 CDD:462262 24/85 (28%)
SFP1 <131..317 CDD:227516 72/268 (27%)
C2H2 Zn finger 217..237 CDD:275368 8/19 (42%)
zf-H2C2_2 229..254 CDD:463886 12/24 (50%)
C2H2 Zn finger 245..265 CDD:275368 7/19 (37%)
C2H2 Zn finger 273..293 CDD:275368 5/19 (26%)
C2H2 Zn finger 301..321 CDD:275368 7/19 (37%)
pitaNP_611806.3 zf-AD 17..92 CDD:214871 23/83 (28%)
COG5048 <281..506 CDD:227381 43/141 (30%)
C2H2 Zn finger 288..308 CDD:275368 2/19 (11%)
C2H2 Zn finger 316..336 CDD:275368 8/19 (42%)
C2H2 Zn finger 344..364 CDD:275368 7/19 (37%)
C2H2 Zn finger 372..388 CDD:275370 4/15 (27%)
C2H2 Zn finger 400..420 CDD:275368 7/19 (37%)
C2H2 Zn finger 428..448 CDD:275368
C2H2 Zn finger 456..476 CDD:275368
C2H2 Zn finger 486..506 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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