DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17359 and prg

DIOPT Version :9

Sequence 1:NP_648679.1 Gene:CG17359 / 39549 FlyBaseID:FBgn0036396 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_001260253.1 Gene:prg / 34177 FlyBaseID:FBgn0285971 Length:558 Species:Drosophila melanogaster


Alignment Length:406 Identity:91/406 - (22%)
Similarity:153/406 - (37%) Gaps:128/406 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DISQMCRVCRDESD-CLLDIY--TEPYASSNRVQEQEPVLATMLRECSGCSVHKEDGMPQFICVE 63
            |:| .||:|...:| ..|:|:  |..:.....:.|....|.::..:.:.|       :.:.||..
  Fly    13 DVS-TCRLCHHNTDPNSLNIFDDTVQFCKDVSIAEVSKSLWSVQYDRNEC-------LSELICSR 69

  Fly    64 CAEAVRNAYRLRRQCRKSHQYF-EQLRLMMKELDDIEYCLNIGDNIEPQMPVSVMEAGKTPETSE 127
            |.|.:..|:.||:..::..|.. |||:.|:|:.......||....      |.|.|.|       
  Fly    70 CLEILEEAFELRKGMQEREQSLQEQLKEMIKDHPKHRPGLNGNPG------VFVPEEG------- 121

  Fly   128 PLLVELVQVKYMPPEPKPISSPLPDNNEHKLAQSYSPAKTPHNKSKRRARSYSDNDSWSPDSELE 192
            .::||      :.||      .|.:::|.:.|..          |.....:|.|:|. ..:.:.:
  Fly   122 CIIVE------VDPE------NLAESSEEEFALG----------SDGEYENYDDDDE-EEEEDYD 163

  Fly   193 HEDDDKIWNA-------------------------SKRGKPKR------------VPG------- 213
            .||::...|.                         :...:|||            :|.       
  Fly   164 EEDEEDGQNGEDVDMPLGMDAAQMAAQQSVANNANTTEARPKRAFLCQYCDLGFTLPAECQEHEL 228

  Fly   214 ------------------------------------PYRCKLCTQSFTQKQNLEIHMRIHTGERP 242
                                                ||.|..|.:.|.::.:|:.|..:|||.||
  Fly   229 AAHDPNAPYCCNFCNIKLVTRPALISHIKTLHDPDRPYVCAHCRKGFVRRSDLKKHTIVHTGVRP 293

  Fly   243 YKCSLCPRSFAQKGNLQSHTRCHTGERPFGCPNCPKRFRQVGQLQVHTRTHTGEQPFKCSKCQQS 307
            :.|::|.:||::..||..|.|.|:|.:||.|..||:.|:...::..|||:|...:.|:|.:|..|
  Fly   294 FTCNVCSKSFSRNTNLTKHMRIHSGVKPFVCQQCPRSFQTAVEMMRHTRSHGEVKAFQCGRCPYS 358

  Fly   308 FKQLNGLQKHMSAHTR 323
            |.:.:.|..|...|||
  Fly   359 FSRRDKLIAHQQVHTR 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17359NP_648679.1 zf-AD 6..88 CDD:285071 19/85 (22%)
zf-C2H2 215..237 CDD:278523 6/21 (29%)
C2H2 Zn finger 217..237 CDD:275368 5/19 (26%)
zf-H2C2_2 229..254 CDD:290200 11/24 (46%)
C2H2 Zn finger 245..265 CDD:275368 8/19 (42%)
zf-H2C2_2 257..282 CDD:290200 12/24 (50%)
C2H2 Zn finger 273..293 CDD:275368 7/19 (37%)
zf-H2C2_2 286..310 CDD:290200 9/23 (39%)
C2H2 Zn finger 301..321 CDD:275368 6/19 (32%)
prgNP_001260253.1 zf-AD 16..94 CDD:285071 18/84 (21%)
COG5048 <212..340 CDD:227381 29/127 (23%)
C2H2 Zn finger 239..260 CDD:275368 0/20 (0%)
C2H2 Zn finger 268..288 CDD:275368 5/19 (26%)
zf-H2C2_2 280..305 CDD:290200 11/24 (46%)
zf-C2H2 294..316 CDD:278523 8/21 (38%)
C2H2 Zn finger 296..316 CDD:275368 8/19 (42%)
zf-H2C2_2 308..331 CDD:290200 11/22 (50%)
C2H2 Zn finger 324..344 CDD:275368 7/19 (37%)
C2H2 Zn finger 352..372 CDD:275368 6/19 (32%)
C2H2 Zn finger 416..436 CDD:275368
C2H2 Zn finger 443..464 CDD:275368
C2H2 Zn finger 470..490 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457841
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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