DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17359 and Paris

DIOPT Version :10

Sequence 1:NP_648679.1 Gene:CG17359 / 39549 FlyBaseID:FBgn0036396 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_608840.1 Gene:Paris / 33657 FlyBaseID:FBgn0031610 Length:346 Species:Drosophila melanogaster


Alignment Length:334 Identity:96/334 - (28%)
Similarity:155/334 - (46%) Gaps:61/334 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ISQMCRVCRDESDCLLDIYTEPYASSNRVQEQEPVLATMLRECSGCSVHKEDGMPQFICVECAEA 67
            ::::||||.|.|..|::|:..  ....||.     :|.|:.:|:|..|.:.|...:.||.:|.|.
  Fly     1 MAEICRVCMDISGKLVNIFDA--RRRTRVS-----IAEMIAQCTGFEVKRGDLFSEMICPQCYED 58

  Fly    68 VRNAYRLRRQCRKSHQYFEQLRLMMKELDDIEYCLNIGDNIEPQMPVSVMEAGKTPETSEPLLVE 132
            |::||.:|:.|.:|||:               ||....:.||..:...:.|........|...::
  Fly    59 VKSAYGIRQTCEESHQF---------------YCRVRDEGIEDALCALLEEEDWEISEDEDARID 108

  Fly   133 LVQVKYMPPEPKPISSPLPDNNEHKLAQSYSPAKTPHNKSKRRA------RSYSDNDSW-SPDSE 190
                         .:|...|:.:....:.....:..|.|.:|:.      |::.|..|: .|..:
  Fly   109 -------------SASAADDDGKSDSKKVAFECRECHKKYQRKGTFLRHMRTHMDGQSFPCPYCK 160

  Fly   191 ------LEHEDDDKIWNASKRGKPKRVPGPYRCKLCTQSFTQKQNLEIHMRIHTGERPYKCSLCP 249
                  :..:...|..||:|         ||.|..|.::|.|:..|:.|.|.||||||:|||.|.
  Fly   161 RNFRLRVTLKAHMKTHNAAK---------PYECSHCAKTFAQQSTLQSHERTHTGERPFKCSQCS 216

  Fly   250 RSFAQKGNLQSHTRCHTGERPFGCPNCPKRFRQVGQLQVHTRTHTGEQPFKCSKCQQSFKQLNGL 314
            ::|.:..:|:.|.|.|..||||.|..|.|.|.:...|..|.|:||||:|||||.|.::|    .:
  Fly   217 KTFIKSSDLRRHIRTHGSERPFKCSKCTKTFTRKFHLDNHFRSHTGERPFKCSHCPKAF----AM 277

  Fly   315 QKHMSAHTR 323
            ::|:..|:|
  Fly   278 KQHLKQHSR 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17359NP_648679.1 zf-AD 6..88 CDD:462262 28/81 (35%)
SFP1 <131..317 CDD:227516 59/198 (30%)
C2H2 Zn finger 217..237 CDD:275368 7/19 (37%)
zf-H2C2_2 229..254 CDD:463886 14/24 (58%)
C2H2 Zn finger 245..265 CDD:275368 7/19 (37%)
C2H2 Zn finger 273..293 CDD:275368 7/19 (37%)
C2H2 Zn finger 301..321 CDD:275368 5/19 (26%)
ParisNP_608840.1 zf-AD 4..78 CDD:462262 29/95 (31%)
C2H2 Zn finger 128..148 CDD:275368 4/19 (21%)
C2H2 Zn finger 156..176 CDD:275368 2/19 (11%)
COG5048 <180..341 CDD:227381 50/120 (42%)
C2H2 Zn finger 184..204 CDD:275368 7/19 (37%)
C2H2 Zn finger 212..232 CDD:275368 7/19 (37%)
C2H2 Zn finger 240..260 CDD:275368 7/19 (37%)
C2H2 Zn finger 268..288 CDD:275368 7/23 (30%)
C2H2 Zn finger 296..316 CDD:275368
C2H2 Zn finger 324..341 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.