DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17359 and CG17612

DIOPT Version :9

Sequence 1:NP_648679.1 Gene:CG17359 / 39549 FlyBaseID:FBgn0036396 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_608824.1 Gene:CG17612 / 33639 FlyBaseID:FBgn0031597 Length:618 Species:Drosophila melanogaster


Alignment Length:351 Identity:101/351 - (28%)
Similarity:151/351 - (43%) Gaps:79/351 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CRVCRDESDCLLDIYTEPYASSNRVQEQEPVLATMLRECSGCSVHKEDGMPQFICVECAEAVRNA 71
            ||||.::||.|.:|:.:.:      |...|: ||:|.:.:|..|.|.|...::|||.|.:.|:||
  Fly   187 CRVCLEQSDNLTNIFDDAH------QYGIPI-ATILSQYTGMPVEKGDSFSEYICVTCLDVVKNA 244

  Fly    72 YRLRRQCRKSHQYFEQLRLMMKELDDIEYCLNIGDNIEPQMPVSVMEAGKTPETSEP-----LLV 131
            :........:.|.:.|.:..:.::|.|..         ...||.....||.|.....     ||.
  Fly   245 FDDLESKENTIQMYRQPKEEIIDIDSIPV---------KNKPVDYEVTGKPPHRCPQCPKIFLLA 300

  Fly   132 ELVQV------KYMPPEPKPISSPL--------------------PDNNEHKLAQSYSPAKTPHN 170
            ..:|.      :....||..:..|:                    .|..|.:|...|   :.||.
  Fly   301 AKLQAHIRTHNETRTTEPPRLKCPMCPSIYMKRGCLEAHMWIHRASDERESELEPPY---RCPHC 362

  Fly   171 KSKRRARSYSDNDSWSPDSELE-----HEDDDKIWNASKRGKPKRVPGPYRCKLCTQSFTQKQNL 230
            .   :...||        |.||     |||      .|:|...|   ..::|..|...|:...:|
  Fly   363 P---KLFLYS--------SFLEIHIQTHED------VSQRLSRK---SSHKCAQCADVFSDVSSL 407

  Fly   231 EIHMRIHTGERPYKCSLCPRSFAQKGNLQSHTRCHTGERPFGCPNCPKRFRQVGQLQVH-TRTHT 294
            :.|::||.|||.:||.||..||.::.||:||...||   .|.|..|.|.|.....|..| .::||
  Fly   408 KDHVKIHAGERTFKCPLCLMSFQEESNLKSHDCAHT---RFKCHKCSKFFESQNYLDFHFKKSHT 469

  Fly   295 GEQPFKCSKCQQSFKQLNGLQKHMSA 320
            .:.||||.||||:|::.|||::|:|:
  Fly   470 TKGPFKCIKCQQTFQKRNGLKEHISS 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17359NP_648679.1 zf-AD 6..88 CDD:285071 25/80 (31%)
zf-C2H2 215..237 CDD:278523 5/21 (24%)
C2H2 Zn finger 217..237 CDD:275368 5/19 (26%)
zf-H2C2_2 229..254 CDD:290200 13/24 (54%)
C2H2 Zn finger 245..265 CDD:275368 9/19 (47%)
zf-H2C2_2 257..282 CDD:290200 11/24 (46%)
C2H2 Zn finger 273..293 CDD:275368 6/20 (30%)
zf-H2C2_2 286..310 CDD:290200 13/24 (54%)
C2H2 Zn finger 301..321 CDD:275368 11/20 (55%)
CG17612NP_608824.1 zf-AD 187..>246 CDD:285071 24/65 (37%)
C2H2 Zn finger 290..310 CDD:275368 3/19 (16%)
C2H2 Zn finger 323..343 CDD:275370 1/19 (5%)
zf-C2H2_8 356..438 CDD:292531 32/104 (31%)
C2H2 Zn finger 359..379 CDD:275368 7/30 (23%)
C2H2 Zn finger 394..414 CDD:275368 5/19 (26%)
C2H2 Zn finger 422..438 CDD:275368 7/15 (47%)
C2H2 Zn finger 447..463 CDD:275368 5/15 (33%)
C2H2 Zn finger 476..505 CDD:275368 11/20 (55%)
C2H2 Zn finger 513..533 CDD:275368
C2H2 Zn finger 545..565 CDD:275368
C2H2 Zn finger 568..584 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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