DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17359 and CG3407

DIOPT Version :9

Sequence 1:NP_648679.1 Gene:CG17359 / 39549 FlyBaseID:FBgn0036396 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_608809.1 Gene:CG3407 / 33606 FlyBaseID:FBgn0031573 Length:714 Species:Drosophila melanogaster


Alignment Length:535 Identity:105/535 - (19%)
Similarity:163/535 - (30%) Gaps:230/535 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CRVCRDESDCLLDIYT------EPYASSNRVQEQEPVLATMLRE-CSGCSVHKEDGMPQFICVEC 64
            |.:|.......||.:.      ||.....|:..|:|......:| ...|.:..:|          
  Fly   168 CEICGYAVHTQLDFFAHLKQHYEPTVLEQRLVVQDPQQQHQQKEPLDMCGLSAQD---------- 222

  Fly    65 AEAVRNAYRLRRQCRKSHQYFEQLRLMMKELDDIEY----CLNIGDNI------EPQMPVSVMEA 119
                    :|:::..|..|.|:.::|..:...:|.:    ..|:|.|:      ..::...|:..
  Fly   223 --------KLQQEQAKLDQVFQDVQLNFENFHNISHHVNDVANVGVNMVLHGQATDKLNAVVVNT 279

  Fly   120 GKTPET-----------SEPLLV----------------ELVQVK-------------------- 137
            ..||.:           :|.:|.                |||.::                    
  Fly   280 SSTPNSVPVVDDVEFSDTEDMLEGIRNVVDKVSIEDTCDELVDLELTSSGMTAPWFNNNFRDITF 344

  Fly   138 ---YMPPEPKPISS----PLPDNNEH---------------------KLAQSYS----------- 163
               .:|.||.|.||    ||...|.|                     ||.::.|           
  Fly   345 PALLLPGEPPPASSEPATPLLKENPHVGDHMALDFLSPEKADPQEEAKLEKTLSKACEPNEQTLL 409

  Fly   164 -----------PAKTPHNKS------------------------KRRARSYSDNDSWSPDSELEH 193
                       |...|.|.|                        .|.|.|:.:.|   ||:|..:
  Fly   410 VAPPACQTPPIPTVPPANSSIEQLRRSPLELSEAFKLEEDDMTDSRPASSFEEGD---PDAEEPN 471

  Fly   194 E-------DDDKIWNASKRGKPKRVPGPYRCKLCTQSFTQKQNLEIHMRIHTGERPYKCSLCPRS 251
            |       |......|..:.:.|     :.|..|.:.|.....|:.|...|..||.:||..|.||
  Fly   472 ECFQMEVLDTSLTEEAENKTRRK-----HFCDKCNRDFNSYNALKYHQYTHNQERSHKCDSCERS 531

  Fly   252 FAQKGNLQSHTRCHTGERPFGCPNCPKRFRQVGQL------------------------------ 286
            |..:..|::|.|.|:|.:||.|..|..:|||.|.|                              
  Fly   532 FYTQSALKAHERTHSGVKPFKCDKCEFQFRQWGDLKYHIISRHSDVKAHMCEFCGKSFSRRYSLV 596

  Fly   287 ---QVHTR------------------------THTGEQPFKCSKCQQSFKQLNGLQKHMSAHTRG 324
               ::|||                        .||||:|::||.|::.|:....|::|...|  .
  Fly   597 VHRRIHTREKNYACQYCDKTFRASSYLLSHIKVHTGERPYECSICEKKFRVSGDLKRHSRIH--D 659

  Fly   325 KRRTSSQETKRNKFK 339
            ..|||....::.|.|
  Fly   660 PSRTSQPPAEKAKKK 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17359NP_648679.1 zf-AD 6..88 CDD:285071 16/87 (18%)
zf-C2H2 215..237 CDD:278523 5/21 (24%)
C2H2 Zn finger 217..237 CDD:275368 5/19 (26%)
zf-H2C2_2 229..254 CDD:290200 11/24 (46%)
C2H2 Zn finger 245..265 CDD:275368 8/19 (42%)
zf-H2C2_2 257..282 CDD:290200 10/24 (42%)
C2H2 Zn finger 273..293 CDD:275368 10/76 (13%)
zf-H2C2_2 286..310 CDD:290200 13/80 (16%)
C2H2 Zn finger 301..321 CDD:275368 6/19 (32%)
CG3407NP_608809.1 COG5048 <494..656 CDD:227381 43/166 (26%)
C2H2 Zn finger 497..517 CDD:275368 5/19 (26%)
zf-H2C2_2 509..534 CDD:290200 11/24 (46%)
C2H2 Zn finger 525..545 CDD:275368 8/19 (42%)
zf-H2C2_2 537..562 CDD:290200 10/24 (42%)
C2H2 Zn finger 555..574 CDD:275371 6/18 (33%)
zf-C2H2 580..602 CDD:278523 0/21 (0%)
C2H2 Zn finger 582..602 CDD:275368 0/19 (0%)
zf-H2C2_2 594..617 CDD:290200 3/22 (14%)
C2H2 Zn finger 610..630 CDD:275368 0/19 (0%)
zf-H2C2_2 622..645 CDD:290200 8/22 (36%)
zf-C2H2 636..658 CDD:278523 6/21 (29%)
C2H2 Zn finger 638..658 CDD:275368 6/19 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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