DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17359 and CG8944

DIOPT Version :10

Sequence 1:NP_648679.1 Gene:CG17359 / 39549 FlyBaseID:FBgn0036396 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_573065.1 Gene:CG8944 / 32517 FlyBaseID:FBgn0030680 Length:762 Species:Drosophila melanogaster


Alignment Length:327 Identity:75/327 - (22%)
Similarity:111/327 - (33%) Gaps:99/327 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 PVLATMLRE-----------------CSGCSV----------HKE---DGMPQ--FICVECAEAV 68
            |.:...|||                 |:.||:          ||:   .|:.:  |.|..|..:.
  Fly   480 PEIVQTLRELDLHMLTHQPSLGGGYYCNICSIQFHNAQEFDNHKQLHLGGVTEIKFNCELCTASF 544

  Fly    69 RNAYRLRRQCRKSHQYFEQLRLMMKELDDIEYCLNIGDNIEPQMPVSVMEAGKTPETSEPLLVEL 133
                      |:...|.|.||...:||......||          .|:||.|             
  Fly   545 ----------REKANYDEHLRRHNEELFLPSLALN----------HSIMEGG------------- 576

  Fly   134 VQVKYMPPEPKPISSPLPDNNEHKLAQSYSPAKTPHNKSKRRARSYSDNDSWSPDSELEHEDDDK 198
                            |.|:   ::......::...::.|||..:.:.:|.        .:|||:
  Fly   577 ----------------LGDD---EIGVEGEESRGSGSRRKRRHAAKATDDM--------VDDDDR 614

  Fly   199 I---WNASKRGKPKRVPGPYRCKLCTQSFTQKQNLEIHMRIHTGERP--YKCSL--CPRSFAQKG 256
            |   ......|....:..||.|.:|.:||....:|..|..:|..||.  |||..  |.:||..:.
  Fly   615 IGGGGGGGSGGGGTDIAKPYGCDVCRRSFATPGHLNAHRIVHQDERERCYKCDYPQCNKSFVARN 679

  Fly   257 NLQSHTRCHTGERPFGCPNCPKRFRQVGQLQVHTRTHTGEQPFKCSKCQQSFKQLNGLQKHMSAH 321
            :|..|.:.|.....|.|..|.|.|:....||.|.:.|...:.:.|..|..:|.|..||..|...|
  Fly   680 SLFEHLKQHYSNEEFKCDICGKTFKSTKNLQNHKQIHDKIKRYVCQICGSAFAQAAGLYLHKRRH 744

  Fly   322 TR 323
            .|
  Fly   745 NR 746

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17359NP_648679.1 zf-AD 6..88 CDD:462262 16/83 (19%)
SFP1 <131..317 CDD:227516 46/192 (24%)
C2H2 Zn finger 217..237 CDD:275368 6/19 (32%)
zf-H2C2_2 229..254 CDD:463886 11/28 (39%)
C2H2 Zn finger 245..265 CDD:275368 6/21 (29%)
C2H2 Zn finger 273..293 CDD:275368 7/19 (37%)
C2H2 Zn finger 301..321 CDD:275368 7/19 (37%)
CG8944NP_573065.1 MADF_DNA_bdg 259..344 CDD:463144
MADF 379..472 CDD:214738
C2H2 Zn finger 476..496 CDD:275368 4/15 (27%)
C2H2 Zn finger 506..526 CDD:275368 5/19 (26%)
C2H2 Zn finger 537..557 CDD:275368 7/29 (24%)
C2H2 Zn finger 636..656 CDD:275368 6/19 (32%)
COG5048 <666..734 CDD:227381 19/67 (28%)
C2H2 Zn finger 666..688 CDD:275368 6/21 (29%)
C2H2 Zn finger 696..716 CDD:275368 7/19 (37%)
C2H2 Zn finger 724..744 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

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