DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17359 and wu:fc30c06

DIOPT Version :9

Sequence 1:NP_648679.1 Gene:CG17359 / 39549 FlyBaseID:FBgn0036396 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_001314845.1 Gene:wu:fc30c06 / 324469 ZFINID:ZDB-GENE-030131-3190 Length:424 Species:Danio rerio


Alignment Length:257 Identity:75/257 - (29%)
Similarity:103/257 - (40%) Gaps:69/257 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 SVMEAGKTPETSEPL------------LVELVQVKYMPPEPKPISSPLPDNNEHKLAQSYSPAKT 167
            ::|:.....|.||.|            :.|:..:|...||.:...:.|....|    |...|.|.
Zfish     9 AIMKMAFIKEESEDLRIEETFRREDIRIAEVFSLKQEDPEEQTDLTELKKEQE----QLRDPIKE 69

  Fly   168 PHNKSKRRARSYSDNDSWSPDSELEHEDDDKIWNASKRGKPKRVPGPYRCKLCTQSFTQKQNLEI 232
                              ..|.:.||||       |...:.:.:.....|..|.:|||.||||.:
Zfish    70 ------------------DQDFKTEHED-------STHSQTEVIQSSLTCNQCGKSFTHKQNLRV 109

  Fly   233 HMRIHTGERPYKCSLCPRSFAQK----------------------------GNLQSHTRCHTGER 269
            |||:||||:||:||.|..||.:|                            .||..|.|.||||:
Zfish   110 HMRVHTGEKPYRCSQCGLSFTRKQTLNGHMSIHSGVKPYLCAQCGLTFSYRKNLNLHMRIHTGEK 174

  Fly   270 PFGCPNCPKRFRQVGQLQVHTRTHTGEQPFKCSKCQQSFKQLNGLQKHMSAHTRGKRRTSSQ 331
            |:.|..|...||:...|::|.|.||||:|:.|::|..||........|...||..|..|.:|
Zfish   175 PYSCTRCELSFRKKQCLKIHMRIHTGEKPYLCAQCGLSFTHKQTFNSHTRNHTGEKPHTCAQ 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17359NP_648679.1 zf-AD 6..88 CDD:285071
zf-C2H2 215..237 CDD:278523 12/21 (57%)
C2H2 Zn finger 217..237 CDD:275368 12/19 (63%)
zf-H2C2_2 229..254 CDD:290200 16/24 (67%)
C2H2 Zn finger 245..265 CDD:275368 10/47 (21%)
zf-H2C2_2 257..282 CDD:290200 12/24 (50%)
C2H2 Zn finger 273..293 CDD:275368 7/19 (37%)
zf-H2C2_2 286..310 CDD:290200 12/23 (52%)
C2H2 Zn finger 301..321 CDD:275368 5/19 (26%)
wu:fc30c06NP_001314845.1 C2H2 Zn finger 94..114 CDD:275368 12/19 (63%)
zf-H2C2_2 106..131 CDD:290200 16/24 (67%)
C2H2 Zn finger 122..142 CDD:275368 6/19 (32%)
COG5048 146..>390 CDD:227381 31/91 (34%)
C2H2 Zn finger 150..170 CDD:275368 4/19 (21%)
C2H2 Zn finger 178..198 CDD:275368 7/19 (37%)
zf-H2C2_2 191..215 CDD:290200 12/23 (52%)
C2H2 Zn finger 206..226 CDD:275368 5/19 (26%)
C2H2 Zn finger 234..254 CDD:275368 1/3 (33%)
zf-H2C2_2 246..271 CDD:290200
C2H2 Zn finger 262..282 CDD:275368
C2H2 Zn finger 290..310 CDD:275368
C2H2 Zn finger 318..338 CDD:275368
C2H2 Zn finger 346..366 CDD:275368
zf-H2C2_2 359..381 CDD:290200
C2H2 Zn finger 374..394 CDD:275368
C2H2 Zn finger 402..422 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588259
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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