DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17359 and CG18262

DIOPT Version :10

Sequence 1:NP_648679.1 Gene:CG17359 / 39549 FlyBaseID:FBgn0036396 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster


Alignment Length:181 Identity:57/181 - (31%)
Similarity:80/181 - (44%) Gaps:38/181 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 RSYSDNDSWSPDSELEHEDD-----DKIWNASKRGKPKRVPGP---YRCK--------------- 218
            |:|:...|......|:|.:.     ||  :||:|...|| .||   |:|.               
  Fly   179 RAYNTKRSLQSHRRLKHSEANGGSLDK--SASERNSKKR-KGPPKVYKCNEEACNQTFRTERDLR 240

  Fly   219 ------------LCTQSFTQKQNLEIHMRIHTGERPYKCSLCPRSFAQKGNLQSHTRCHTGERPF 271
                        :|.:.|||..|:..|.:.|:|.:|:||..|..:|..:..|.||:.||||..|.
  Fly   241 GHRWKHTGIFCDICGKPFTQSGNMMRHRQRHSGIKPHKCPECDATFYTQKELSSHSICHTGRMPC 305

  Fly   272 GCPNCPKRFRQVGQLQVHTRTHTGEQPFKCSKCQQSFKQLNGLQKHMSAHT 322
            .|..|.:..|..|.|..|.|.||||:|.||..|.::|...:.|..|..:||
  Fly   306 ICEVCGRPCRDRGVLTAHMRRHTGERPAKCEVCGKAFYSFHDLNVHAVSHT 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17359NP_648679.1 zf-AD 6..88 CDD:462262
SFP1 <131..317 CDD:227516 54/174 (31%)
C2H2 Zn finger 217..237 CDD:275368 7/46 (15%)
zf-H2C2_2 229..254 CDD:463886 9/24 (38%)
C2H2 Zn finger 245..265 CDD:275368 6/19 (32%)
C2H2 Zn finger 273..293 CDD:275368 7/19 (37%)
C2H2 Zn finger 301..321 CDD:275368 5/19 (26%)
CG18262NP_572453.1 COG5236 <222..>313 CDD:227561 25/90 (28%)
C2H2 Zn finger 224..246 CDD:275368 1/21 (5%)
C2H2 Zn finger 251..271 CDD:275368 6/19 (32%)
zf-H2C2_2 263..288 CDD:463886 9/24 (38%)
C2H2 Zn finger 279..327 CDD:275368 18/47 (38%)
zf-H2C2_2 320..342 CDD:463886 11/21 (52%)
C2H2 Zn finger 335..355 CDD:275368 5/19 (26%)
C2H2 Zn finger 363..383 CDD:275368
zf-C2H2 389..411 CDD:395048
C2H2 Zn finger 391..411 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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