DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17359 and Zfp954

DIOPT Version :9

Sequence 1:NP_648679.1 Gene:CG17359 / 39549 FlyBaseID:FBgn0036396 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_001100942.1 Gene:Zfp954 / 308320 RGDID:1561308 Length:415 Species:Rattus norvegicus


Alignment Length:276 Identity:76/276 - (27%)
Similarity:112/276 - (40%) Gaps:59/276 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 LRLMMKELDDIEYCLNIGD-------------------NIEPQMPVS---VMEAGKTPETSEPLL 130
            |||.:..:.|:....:.||                   .:|.:.|:.   ..|.|.:..|.:..:
  Rat    81 LRLELSGIQDLTQAESCGDLSVPALRFLTPCLWTGCWIKVESESPIEQSLSAEGGVSLSTLQQQM 145

  Fly   131 VELVQVKYMPPEPKPISSPLPDNNEHKLAQSYSPAKTP-------HNKSKRRARSYSD------- 181
            :...:...:..:...|.........|::..|...|.|.       .|:.|....:|..       
  Rat   146 LCCAETPLLSTDNVTILQTSSSLLRHQVTSSGRDAPTNTESGEAIQNEKKNCKCTYCGKIFTSIS 210

  Fly   182 --NDSWSPDSELEHEDDDKIWNASKRGKPKRVPGPYRCKLCTQSFTQKQNLEIHMRIHTGERPYK 244
              |..|            ||....|         |::|..|.:||:||..|..|.|:||||:||:
  Rat   211 HLNRHW------------KIHTGEK---------PFQCSECGKSFSQKAFLIKHFRMHTGEKPYR 254

  Fly   245 CSLCPRSFAQKGNLQSHTRCHTGERPFGCPNCPKRFRQVGQLQVHTRTHTGEQPFKCSKCQQSFK 309
            |..|.::|....:|.||...||||.||.|..|.|.:|....|:||.|.||||.||:||:|.:|::
  Rat   255 CGECGKAFKHNISLISHQGLHTGEMPFKCTECGKSYRSREGLKVHYRFHTGEMPFECSECGKSYR 319

  Fly   310 QLNGLQKHMSAHTRGK 325
            ...||..|..:||..|
  Rat   320 SREGLLNHFYSHTAEK 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17359NP_648679.1 zf-AD 6..88 CDD:285071 76/276 (28%)
zf-C2H2 215..237 CDD:278523 9/21 (43%)
C2H2 Zn finger 217..237 CDD:275368 9/19 (47%)
zf-H2C2_2 229..254 CDD:290200 12/24 (50%)
C2H2 Zn finger 245..265 CDD:275368 6/19 (32%)
zf-H2C2_2 257..282 CDD:290200 12/24 (50%)
C2H2 Zn finger 273..293 CDD:275368 8/19 (42%)
zf-H2C2_2 286..310 CDD:290200 14/23 (61%)
C2H2 Zn finger 301..321 CDD:275368 7/19 (37%)
Zfp954NP_001100942.1 KRAB 42..95 CDD:214630 4/13 (31%)
KRAB 42..81 CDD:279668 76/276 (28%)
zf-C2H2 197..219 CDD:278523 4/33 (12%)
C2H2 Zn finger 199..219 CDD:275368 4/31 (13%)
zf-H2C2_2 211..236 CDD:290200 10/45 (22%)
C2H2 Zn finger 227..247 CDD:275368 9/19 (47%)
zf-H2C2_2 240..264 CDD:290200 12/23 (52%)
C2H2 Zn finger 255..275 CDD:275368 6/19 (32%)
C2H2 Zn finger 283..303 CDD:275368 8/19 (42%)
zf-H2C2_2 296..320 CDD:290200 14/23 (61%)
C2H2 Zn finger 311..331 CDD:275368 7/19 (37%)
zf-C2H2_8 336..409 CDD:292531 76/276 (28%)
C2H2 Zn finger 339..359 CDD:275368
zf-C2H2 363..385 CDD:278523
C2H2 Zn finger 365..385 CDD:275368
C2H2 Zn finger 393..413 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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