DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17359 and LOC110439525

DIOPT Version :9

Sequence 1:NP_648679.1 Gene:CG17359 / 39549 FlyBaseID:FBgn0036396 Length:339 Species:Drosophila melanogaster
Sequence 2:XP_021331300.1 Gene:LOC110439525 / 110439525 -ID:- Length:434 Species:Danio rerio


Alignment Length:207 Identity:74/207 - (35%)
Similarity:96/207 - (46%) Gaps:33/207 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 EPKPISSPLPDNNEHKLAQSYSPAKTPHNKSKRRAR---------SYSDNDSWSPDSELEHEDDD 197
            |.||          .::.....|..|....|:.|.|         |.....|:|..|.|:....:
Zfish    44 EEKP----------QEITTDEKPTLTKKTSSRGRPRKSKSACNFGSKQSRKSFSQKSNLDVHTRE 98

  Fly   198 KIWNASKRGKP-KRVPG------------PYRCKLCTQSFTQKQNLEIHMRIHTGERPYKCSLCP 249
            |.:...:.||. ..:.|            |:.||.|.:|||||.||::|||:||.||||.|..|.
Zfish    99 KPYTCEQCGKSFGHIQGFENHMRIHTGEKPFSCKQCGKSFTQKANLDVHMRVHTKERPYTCEQCG 163

  Fly   250 RSFAQKGNLQSHTRCHTGERPFGCPNCPKRFRQVGQLQVHTRTHTGEQPFKCSKCQQSFKQLNGL 314
            :||..|....:|.|.||||||:.|..|.|.|...|...||.|.||||:|:.|.:|.:||.|....
Zfish   164 KSFTYKQGFTTHMRIHTGERPYTCQQCKKSFYHPGNFAVHMRIHTGERPYTCQQCGKSFYQSGNF 228

  Fly   315 QKHMSAHTRGKR 326
            ..||..|| |:|
Zfish   229 AAHMRIHT-GER 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17359NP_648679.1 zf-AD 6..88 CDD:285071
zf-C2H2 215..237 CDD:278523 13/21 (62%)
C2H2 Zn finger 217..237 CDD:275368 13/19 (68%)
zf-H2C2_2 229..254 CDD:290200 15/24 (63%)
C2H2 Zn finger 245..265 CDD:275368 7/19 (37%)
zf-H2C2_2 257..282 CDD:290200 12/24 (50%)
C2H2 Zn finger 273..293 CDD:275368 8/19 (42%)
zf-H2C2_2 286..310 CDD:290200 12/23 (52%)
C2H2 Zn finger 301..321 CDD:275368 7/19 (37%)
LOC110439525XP_021331300.1 COG5048 <70..360 CDD:227381 66/171 (39%)
C2H2 Zn finger 103..123 CDD:275368 3/19 (16%)
C2H2 Zn finger 131..151 CDD:275368 13/19 (68%)
C2H2 Zn finger 159..179 CDD:275368 7/19 (37%)
C2H2 Zn finger 187..207 CDD:275368 8/19 (42%)
C2H2 Zn finger 215..235 CDD:275368 7/19 (37%)
C2H2 Zn finger 243..263 CDD:275368
C2H2 Zn finger 271..291 CDD:275368
C2H2 Zn finger 299..319 CDD:275368
C2H2 Zn finger 327..347 CDD:275368
C2H2 Zn finger 412..432 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588370
Domainoid 1 1.000 42 1.000 Domainoid score I12423
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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