DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17359 and LOC100536900

DIOPT Version :9

Sequence 1:NP_648679.1 Gene:CG17359 / 39549 FlyBaseID:FBgn0036396 Length:339 Species:Drosophila melanogaster
Sequence 2:XP_003198538.1 Gene:LOC100536900 / 100536900 -ID:- Length:359 Species:Danio rerio


Alignment Length:201 Identity:75/201 - (37%)
Similarity:99/201 - (49%) Gaps:20/201 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 LAQSYSPAKTPH-NKSKRRARSYSDNDSWSPDSELE-----HEDDDKIWNASKRGKP-------- 208
            |.:..|..:.|. :|||....|.....|:|...:|:     |: .:|.....:.||.        
Zfish    58 LTKMTSSCRRPRKSKSKFNFSSKQSRKSFSQKPKLDVHMRVHK-GEKTCTCKQCGKSFYKTSSLT 121

  Fly   209 --KRV---PGPYRCKLCTQSFTQKQNLEIHMRIHTGERPYKCSLCPRSFAQKGNLQSHTRCHTGE 268
              .|:   ..||.||.|.:||....||.:||||||||:||.|..|.:||.||.|.::|.|.||||
Zfish   122 MHMRIHTGEKPYTCKQCGKSFCNTTNLTMHMRIHTGEKPYTCEQCGKSFCQKENFKTHMRIHTGE 186

  Fly   269 RPFGCPNCPKRFRQVGQLQVHTRTHTGEQPFKCSKCQQSFKQLNGLQKHMSAHTRGKRRTSSQET 333
            ||:.|..|.|.||..|...||.||||||:.:.|.:|.:.|.....|..||..||..|..|.::..
Zfish   187 RPYTCQQCGKSFRHAGNFTVHMRTHTGERLYTCQQCGKGFYHAGNLAVHMKVHTGEKPYTCTECG 251

  Fly   334 KRNKFK 339
            |...:|
Zfish   252 KSFTYK 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17359NP_648679.1 zf-AD 6..88 CDD:285071
zf-C2H2 215..237 CDD:278523 11/21 (52%)
C2H2 Zn finger 217..237 CDD:275368 10/19 (53%)
zf-H2C2_2 229..254 CDD:290200 16/24 (67%)
C2H2 Zn finger 245..265 CDD:275368 9/19 (47%)
zf-H2C2_2 257..282 CDD:290200 13/24 (54%)
C2H2 Zn finger 273..293 CDD:275368 9/19 (47%)
zf-H2C2_2 286..310 CDD:290200 11/23 (48%)
C2H2 Zn finger 301..321 CDD:275368 6/19 (32%)
LOC100536900XP_003198538.1 COG5048 <54..336 CDD:227381 75/201 (37%)
C2H2 Zn finger 107..127 CDD:275368 3/19 (16%)
zf-H2C2_2 119..142 CDD:290200 6/22 (27%)
C2H2 Zn finger 135..155 CDD:275368 10/19 (53%)
zf-H2C2_2 147..170 CDD:290200 14/22 (64%)
C2H2 Zn finger 163..183 CDD:275368 9/19 (47%)
zf-H2C2_2 175..200 CDD:290200 13/24 (54%)
C2H2 Zn finger 191..211 CDD:275368 9/19 (47%)
C2H2 Zn finger 219..239 CDD:275368 6/19 (32%)
zf-H2C2_2 231..256 CDD:290200 8/24 (33%)
C2H2 Zn finger 247..267 CDD:275368 2/11 (18%)
zf-H2C2_2 260..284 CDD:290200
C2H2 Zn finger 275..295 CDD:275368
C2H2 Zn finger 331..351 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588299
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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